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PLM4_65_b1_redo_sep16_scaffold_12789

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_12789_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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comp(2..727)
-----------------
DNA (726bp)
protein (242aa)
Binding-protein-dependent transport systems inner membrane component Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BY10_NITHN
binding-protein-dependent transporters inner membrane component
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM4_65_b1_redo_sep16_scaffold_12789_2
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(724..3957)
-----------------
DNA (3234bp)
protein (1078aa)
Fis family transcriptional regulator Tax=Marinobacter lipolyticus RepID=UPI0003789DC6
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:AKF03075.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
cbrB; two-component response regulator CbrB
PLM4_65_b1_redo_sep16_scaffold_12789_3
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3954..5306)
-----------------
DNA (1353bp)
protein (451aa)
3-phosphoshikimate 1-carboxyvinyltransferase Tax=Streptomyces RepID=UPI00036ED5F2
3-phosphoshikimate 1-carboxyvinyltransferase
Tax=CG_Syntroph_02
PLM4_65_b1_redo_sep16_scaffold_12789_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(5278..6027)
-----------------
DNA (750bp)
protein (250aa)
Metal-dependent hydrolase, beta-lactamase superfamily Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A832_PELCD
metal-dependent hydrolase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_12789_5
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(6064..6690)
-----------------
DNA (627bp)
protein (209aa)
metallophosphoesterase; K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] bin=bin5_DeltaP species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_12789_6
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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6876..7769
-----------------
DNA (894bp)
protein (298aa)
UspA domain protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8D8_SPHTD
UspA domain-containing protein
UspA domain protein {ECO:0000313|EMBL:ACZ40081.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM4_65_b1_redo_sep16_scaffold_12789_7
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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comp(7802..8215)
-----------------
DNA (414bp)
protein (138aa)
Putative nucleic acid-binding protein, contains PIN domain Tax=Pyrobaculum oguniense (strain DSM 13380 / JCM 10595 / TE7) RepID=H6Q8H4_PYROT
putative nucleic acid-binding protein, contains PIN domain
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM4_65_b1_redo_sep16_scaffold_12789_8
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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comp(8212..8451)
-----------------
DNA (240bp)
protein (80aa)
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM4_65_b1_redo_sep16_scaffold_12789_9
unknown

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comp(8468..8641)
-----------------
DNA (174bp)
protein (58aa)

This feature has no annotations

Displaying 9 items

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