ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_5068_12

Organism: PLM4_65_b1_sep16_Acidobacteria_68_8

near complete RP 42 / 55 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(11469..12863)

Top 3 Functional Annotations

Value Algorithm Source
Fis family two component sigma54 specific transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 449.0
  • Bit_score: 480
  • Evalue 1.10e-132
two component sigma-54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 454.0
  • Bit_score: 469
  • Evalue 9.70e-130
Tax=RBG_16_Aminicenantes_66_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.2
  • Coverage: 449.0
  • Bit_score: 488
  • Evalue 5.90e-135

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Aminicenantes_66_30_curated → Aminicenantes → Bacteria

Sequences

DNA sequence
Length: 1395
ATGTGCGCAGCTGCCAAAGCGTCGGTGCTGGTCGTGGACGATGAAGCGGACATTCGCGAAAGCCTGCGCATGATTCTCGAGTTCGAGGGTTACCGCGTGGAGGAGGCCCGGAACGGTCTAGAGGTCCTGCAAAAGGTCCGCGAGCGCCCGCCGGACGCCCTGCTGCTCGACATCCGCATGCCCGAGATGGATGGGCTCGAAACGCTGCGCGCCCTGCGCGAGCGCGGCTACGACATGCCGGTTCTGGTGCTCTCCGGCCACGCCGACGTCGCGACCGCCGTGGAGGCGACCCGGAGGGGCGCATTCGACTTCTTCGAGAAACCTCTCCAGCGCGACCGGGTCCTCCTCACCCTGCGCAATGCGGTCGAGGCCTTTCGCCTGCAGCGCGACAGCCGGCATGGTGCGGCGGCTGGCGACGGCGTCGAGCTCATCGGCACGTCCCCGGCGATGCACCGACTGCGCGAGACCATCGAGCTCGCGGCACCGACCGCCGCCACCGTTCTGGTGACGGGGGAGAGCGGCACCGGCAAGGAGCTGGTCGCCCGAGGAATCCACAACCTGAGCCAGCGCCGGGCGCAGCCTTTCGTACAGGTCAACTGCGCCGCTATCCCGGAAGAGCTGATCGAATCGGAGCTCTTCGGGCACGAGAAGGGCAGCTTCACCGGCGCGGTGCGCCGACAGACCGGAAAGTTCGTCGCCGCCGACGGCGGGACGATCTTCCTCGACGAGGTCGGCGACATGTCGGCGCGGACGCAAGCGAAAGTCCTGCGCGTACTCGAGAGCGGCGACGTCGAACCCATCGGTGCGGACAAGCTCGTTCGGGTCAGCGTTCGCGTCGTGGCGGCGACCAACCGGAATCTGGAGGAGGAGATCCGGGCCGGACGGTTTCGTGAGGACCTTTTCTACCGTCTGAACGTCGTGCCTATTCGGACTCCGCCACTGCGCGAACGCCTGGAGGACGTACCTCTCCTGGTCGAGCATTTCGTCCGCCGCTTCTGCGAGGCGAACAACTACCGCCGCAAGCGGATCACTCCGGAAGCGATGGACGTTCTTCAGCACCTACCCTTCCGGGGCAATGTCCGCGAGTTGCGCAACATGGTCGAGCGCCTCCTCATTCTGACTCCGGGCGAAGCGATCGGCCGGGAGGCCGTCGCCGAGGTGGCCGGGAACACGCGGGTCGAGCTCGGGCAGTCCTTCAAGGGACTCAAGACGCTGCGCGAGTTCCGCGATCAGGCGGAAAAACTCTTCCTCGTGCAGAAACTCGGTGACCACCAGTGGAACGTGACGCAGACCGCCCTCGCCATCGACACGCCGCGCAGCAACCTCTACAAGAAGATGGAGCAGTATGAAATCCGCAGACGCGAGCCCCCAGACCTTCCGCGCGATGACGAGTAA
PROTEIN sequence
Length: 465
MCAAAKASVLVVDDEADIRESLRMILEFEGYRVEEARNGLEVLQKVRERPPDALLLDIRMPEMDGLETLRALRERGYDMPVLVLSGHADVATAVEATRRGAFDFFEKPLQRDRVLLTLRNAVEAFRLQRDSRHGAAAGDGVELIGTSPAMHRLRETIELAAPTAATVLVTGESGTGKELVARGIHNLSQRRAQPFVQVNCAAIPEELIESELFGHEKGSFTGAVRRQTGKFVAADGGTIFLDEVGDMSARTQAKVLRVLESGDVEPIGADKLVRVSVRVVAATNRNLEEEIRAGRFREDLFYRLNVVPIRTPPLRERLEDVPLLVEHFVRRFCEANNYRRKRITPEAMDVLQHLPFRGNVRELRNMVERLLILTPGEAIGREAVAEVAGNTRVELGQSFKGLKTLREFRDQAEKLFLVQKLGDHQWNVTQTALAIDTPRSNLYKKMEQYEIRRREPPDLPRDDE*