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PLM4_65_b1_redo_sep16_scaffold_5514_14

Organism: PLM4_65_b1_sep16_Acidobacteria_68_8

near complete RP 42 / 55 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(11384..12661)

Top 3 Functional Annotations

Value Algorithm Source
LysM domain protein bin=GWC2_Nitrospirae-rel_56_14 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 23.6
  • Coverage: 394.0
  • Bit_score: 99
  • Evalue 5.00e-18
peptidoglycan-binding protein LysM similarity KEGG
DB: KEGG
  • Identity: 35.6
  • Coverage: 118.0
  • Bit_score: 73
  • Evalue 8.30e-11
Tax=RBG_16_Acidobacteria_70_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 35.4
  • Coverage: 427.0
  • Bit_score: 212
  • Evalue 7.40e-52

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Taxonomy

RBG_16_Acidobacteria_70_10_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
ATGGCAAATCGCCAACTCAGGATTTTCGCGCTGCTCGGCTCTGCCGCCCTCGCTGGCGCTGCTCTGCAAGCGGCGGACACGCCGCCGACCCATCTCAAGCTCGTCAACGGGCACTGGACGGCCTGGGAGGCTCCGCCAACTCCCGAGGGCGCCAGAGTTCACATCGTCGTGCCGGGAGACACCTTCTGGGCGCTGGCGGCCACGGATCTCGGCAATCCGTACCTCTGGCCGCAGATCTGGGAGAAAAACCAGTACGTTCGCGACGCCCACTGGATCTATCCTGGAGACCCGCTGATTCTCGATCTCCAGGTCTCCGGCGCCACCACGATCGGAGCTCTTTCGGGCGGAGGAGAGGCGGGTGACGGTGCCATCGAAGAGGTCGCTGGCGGGGATGCCGGCGACGGCAGTGGTGACGTCGAGGGCGCCGCGGGCGGCAATGCCGGCGCCACCGCCGACCGCGGCCTTACCGGTGCGGCCGCGATTCCCGGGGTCGCCTCGTACAGCGGCAAAGGAAAAGTACCCGTACCGCTCGGAACCCAGGACGACATCTACTGCTCGGGATACATCGGGGACCCGAACGAGACCTTCGGCTACTCGGTGATCGGCTCGGAGTTCGAGGTGCTCGCGCCCCAGCTCAATGGCACGAGCTACGGGAATGTGGAAGGGATCTATGGCACGGTCGACGCCATCAAGTACAAGTTGACCTCCGGCGACATCGTCTATCTCGACGGCGGGCGCGCCGCCGGACTCTCCCCGGGAATGCTGTTCACCGCGGTCGCGAGCGGAAGGCTGGTCCGGCATCCGCTCTCGCACGACGCGCTCGGAAGACAGTACAACTACATGGGACGCGTCCGGGTGCTCTCGGTGCAGGAGGACTCTGCCATCGCCGAGATCGTCCAGAACTGCGATGGAATCTCGGTCGGGATGAAGCTCAAGTCTTTCGAGCCGGAACCGATTCCGCTCGCCCGCCGGAGCCCGCTGCGACCGTTCAGCGAGCCGGCGAGCGGCGAGGCCCTCGCCAGCGCGGCGGTGATCGTCTCGTCGCCGGTCGATCTCGTGACCCTCGGCCAGGACCATGTCGTGTTCATCGATCGCGGAGAGGAAGATGAGGTCCTTCCCGGCGATCTCTTCACGATCTATCGCATGAACCGCGACAGCCAGCCGGCCGTGGTGCTGGGCGAGCTCGCGGTGCTCTCTGTGCAGGCCCATACGGCGATCGCCAGAATCCTCGAGTCGCGCTACCCGGTCTATGTCGGTGACCGGCTCGAGCGCAAGTAA
PROTEIN sequence
Length: 426
MANRQLRIFALLGSAALAGAALQAADTPPTHLKLVNGHWTAWEAPPTPEGARVHIVVPGDTFWALAATDLGNPYLWPQIWEKNQYVRDAHWIYPGDPLILDLQVSGATTIGALSGGGEAGDGAIEEVAGGDAGDGSGDVEGAAGGNAGATADRGLTGAAAIPGVASYSGKGKVPVPLGTQDDIYCSGYIGDPNETFGYSVIGSEFEVLAPQLNGTSYGNVEGIYGTVDAIKYKLTSGDIVYLDGGRAAGLSPGMLFTAVASGRLVRHPLSHDALGRQYNYMGRVRVLSVQEDSAIAEIVQNCDGISVGMKLKSFEPEPIPLARRSPLRPFSEPASGEALASAAVIVSSPVDLVTLGQDHVVFIDRGEEDEVLPGDLFTIYRMNRDSQPAVVLGELAVLSVQAHTAIARILESRYPVYVGDRLERK*