ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_16301_2

Organism: PLM4_65_b1_sep16_Acidobacteria_68_8

near complete RP 42 / 55 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(744..2183)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase (GGDEF) domain-containing protein Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y585_THIV6 similarity UNIREF
DB: UNIREF100
  • Identity: 49.9
  • Coverage: 481.0
  • Bit_score: 441
  • Evalue 1.00e-120
diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 49.9
  • Coverage: 481.0
  • Bit_score: 441
  • Evalue 2.90e-121
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AFL72153.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.9
  • Coverage: 481.0
  • Bit_score: 441
  • Evalue 1.40e-120

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiocystis violascens → Thiocystis → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1440
GTGCGCTTGCCGATCCGGACCAAACTCTTCCTCAGCCATTTCCTGGCTGTGCTGCTTGTTTCAGGCAGCATCGGCACATACTTCTACAAGCAGTCGACGGCGAGTCTCCTCGAGAGCCTGCAGAACCGGCTGCGCTACAGCGCCGGCCTCCTGGCGCGCACGATCGACGGCGCGGAGCTCGCGGCCATCCGGGGTTCGCAGGACGTCGCGCTTCCCGAGTACTCGCGCCTCCTCGCGCTCGTGCGCGACTTTCAGCAGACCAATCCAGACATCGCCTTCATCTACGTCATGCGTCGCGATGGCGCAGCGAGCGAAACGGGCGCCGGCGAGGTCCGCTTCGTGCTGGATTCCGATACCTCCCCCGAGCAGGCCTTGCCGGGAGATCCGTACGAGGAGAACGTACCGCGACTGCGCGAAGGATTCTCCCACCCCGCCGCCGACGATGCGATCACCCAGGACCGCTGGGGTTACTTTCTCTCCGGCTACGCGCCGGTGAAGAACGGCGCCGGCAGATTCCTCGTCGGCCTCGACATGCGCGCCGACGAGGTGCAGAAGAAGTTCCAGCGCATCCGCGTCGCCGGCGCCGTGTCGCTCCTGCTGTCCATCATCCTCGCGGCGGCCTTCAGCCGGCTGCTCGCCTCCCGCATCACACAGCCGGTGACCCGAGTCATCGCGCGCACCGGCGAGATCGCGCGCGGTGAGCTCAGTGGCGAAGTCGCCGTCGCGACCGGCGACGAGCTCGAAGATCTCGCGGTCGCGGTCAACCGCATGGCCGGGGACCTGCTGGAGAGCCAGAAAGAACGCGAGCAGGCGATGCTGGAGATCGCCGAGGCGAATCTCCACCTCGAAGCGCGGATCGCCGAGCGCACCGTCAAGCTCTCCGAGCTCAACGCCGCCCTGCTCGCGGAGATCGAGGAGAGGAAGAGCGCCGAGCAACGGCTCGAGCACGCGGCAACCAGCGACTACCTGACCGGCCTGCTCAACCGCCCGGCGATGCTGCGCCTGCTCGATCAGGAGACCGAGCGTGTCCGCCGCACGACCGAGCCCTTTTCGCTGGTGCTCGCGGACTTGGACCACTTCAAGCCGATCAACGACCGCTACGGTCACTTCGTCGGCGACCAGGCGCTGGCGCGGGTCGCCGACCTGCTGCGGTCGAGCCTGCGCCGGCAAGATGCGATCTGCCGCTGGGGCGGGGACGAGATGCTCATCTTCCTGCCCGAAACCAACCTCGCCGGGGCCGTGGAGGCCGCGGAGAAGATCCGCCTCCGGCTGGTCGAAATCCCCCTCGTCGTCCACGACGAGGAGATCCGGCTTTCCCTCTCCATGGGTGTCGCCGAAGCCGCCCGGGACGAGGCGATCGCGGAGGTCGTTCACCGCGCCGACGAGGCGCTCTACCGCGCCAAACAGGAGGGCCGCAACCGCGTCGCCCGCTCCGCCTAG
PROTEIN sequence
Length: 480
VRLPIRTKLFLSHFLAVLLVSGSIGTYFYKQSTASLLESLQNRLRYSAGLLARTIDGAELAAIRGSQDVALPEYSRLLALVRDFQQTNPDIAFIYVMRRDGAASETGAGEVRFVLDSDTSPEQALPGDPYEENVPRLREGFSHPAADDAITQDRWGYFLSGYAPVKNGAGRFLVGLDMRADEVQKKFQRIRVAGAVSLLLSIILAAAFSRLLASRITQPVTRVIARTGEIARGELSGEVAVATGDELEDLAVAVNRMAGDLLESQKEREQAMLEIAEANLHLEARIAERTVKLSELNAALLAEIEERKSAEQRLEHAATSDYLTGLLNRPAMLRLLDQETERVRRTTEPFSLVLADLDHFKPINDRYGHFVGDQALARVADLLRSSLRRQDAICRWGGDEMLIFLPETNLAGAVEAAEKIRLRLVEIPLVVHDEEIRLSLSMGVAEAARDEAIAEVVHRADEALYRAKQEGRNRVARSA*