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PLM4_65_b1_redo_sep16_scaffold_19445_7

Organism: PLM4_65_b1_sep16_Acidobacteria_68_8

near complete RP 42 / 55 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: 3784..5040

Top 3 Functional Annotations

Value Algorithm Source
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] bin=CNBR_ACIDO species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 412.0
  • Bit_score: 567
  • Evalue 6.40e-159
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 409.0
  • Bit_score: 563
  • Evalue 1.30e-157
glycine/serine hydroxymethyltransferase similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 403.0
  • Bit_score: 545
  • Evalue 7.30e-153

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATGATCGCTCGCCGCCTCGCCGACGTCGACCCCGAAGTCGCGGTCGACATCGCCGCCGAGGAACTTCGCCAGAACACCGGCCTGGAGCTCATCGCGTCGGAGAACTTCGCCAGCCGCGCCGTCATGGAGGCCGCGGGGAGCGTCCTCACCAACAAGTACGCCGAGGGTTATCCGGGGCGGCGCTACTATGGCGGCTGCGAAGTGGTCGACCGGATCGAGACCCTGGCGATCGACCGTCTCAAGAGGCTCTTCGGCGCCGAGCACGCGAACGTCCAGCCGCACTCCGGTACCTCGGCCAACATGGCGGTCTACTTCGCCATGCTGCGCCCGGGCGACACCCTCCTGGGGATGGATCTCTCCTGCGGCGGCCATCTGACGCACGGTCACCGGCTCTCCTACTCGGGGCGGGACTTCAAGGTCGTGGCTTACGGGGTCGATCGCGCAACCGAGCGCATCGACTATGACGAGGTCGAGCGCCTGGCGCTCGAGCACCGGCCGAAGCTCATCGTCTGCGGCGCCTCCGCCTACAGCCGGACGATCGACTTCGCGCGCTTTCGCTCGATCGCCGACCGCGCCGGCGCGTTGCTGATGGCCGATATCGCGCATATCGCGGGCCTCGTCGCGGCCGGACTGCATCCGTCGCCGGTGCCGCACTGCCACTTTGTCACCTCGACCACGCACAAGACGCTGCGCGGTCCGCGTGGCGGAGTCGTGATGTGCAAGTCCGAATTCGCCAAAGAGATCGACCGCGCGGTCTTTCCCGGAATCCAGGGCGGGCCTCTGATGCACATCATCGCGGCCAAGGCGGTGGCGTTCGGCGAAGCGTTCTCCGAGGGCTTTCGCGCGTACCAGGCGCAGATCGTCGCCAATACCGCGCATCTCGCGTCGGCGCTTGCGGCGGAGGGCTTCCGCATCGTTTCGGGTGGCACGGACAATCACCTCTTCCTGATGGATGTCGCCTGCCGCGGCCTGACCGGAAAGTCCGCGGAAAAAGCGCTCGACGCAGCTGCGATCACCGTCAACAAGAACACCATCCCCTTCGATACCAACTCGCCGATGGTCGCCTCCGGGATTCGCATCGGTACCGCCGCCGTCACGACGCGCGGCATGGCAACGCCCGAGATGGACGCCATCGCGCGGCTCATTGGCGAAGTGCTCCAGGCGCCTGAGGACGCCGCGGTCCAGGGTGCGGTGCGCGAGCGAGTGCGCCTTCTCTGCCGTCGCTTTCCGCTCTACGATGCCTCTGCCGCCAGTTGA
PROTEIN sequence
Length: 419
MIARRLADVDPEVAVDIAAEELRQNTGLELIASENFASRAVMEAAGSVLTNKYAEGYPGRRYYGGCEVVDRIETLAIDRLKRLFGAEHANVQPHSGTSANMAVYFAMLRPGDTLLGMDLSCGGHLTHGHRLSYSGRDFKVVAYGVDRATERIDYDEVERLALEHRPKLIVCGASAYSRTIDFARFRSIADRAGALLMADIAHIAGLVAAGLHPSPVPHCHFVTSTTHKTLRGPRGGVVMCKSEFAKEIDRAVFPGIQGGPLMHIIAAKAVAFGEAFSEGFRAYQAQIVANTAHLASALAAEGFRIVSGGTDNHLFLMDVACRGLTGKSAEKALDAAAITVNKNTIPFDTNSPMVASGIRIGTAAVTTRGMATPEMDAIARLIGEVLQAPEDAAVQGAVRERVRLLCRRFPLYDASAAS*