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PLM4_65_b1_redo_sep16_scaffold_32238_5

Organism: PLM4_65_b1_sep16_Acidobacteria_68_8

near complete RP 42 / 55 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(3303..4304)

Top 3 Functional Annotations

Value Algorithm Source
Efflux pump, RND family, membrane fusion protein Tax=Geobacter metallireducens RepID=Q39Q01_GEOMG bin=16ft_combo_ws3_JS1 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 331.0
  • Bit_score: 340
  • Evalue 1.30e-90
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 331.0
  • Bit_score: 327
  • Evalue 3.30e-87
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 331.0
  • Bit_score: 340
  • Evalue 1.90e-90

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1002
ATGAGTCCCAAGCGCATCATTCCCCGCGCTCTGATCGTCCTGCTCCTCGGACTGGGCGGCTATGCCCTCTGGCACTTCGTCCTCGCGCCGCCCGCCGACGTCAACGGCCTCGTTGCCTCGGGCACGGTGGAAGCGACCGCTGCCCAGCTCGGCTTCCAGGCCCCCGGGCGCATCGCCCTCCTCGCGCCCCGCGAAGGGGATCGCGTCGCGGCCGGAGACGAGCTCGCGCGGCTCGACGTGAGCGAGCTCGCGGCGCGCCGCGCCCAGGCGCTGGCGCAGGTCGAAGCGGTGCGCGCGCAGCTCGACGAGCTCCTCGCCGGCTCGCGCCACGAGGAGCTCTCCCAGGGGCGCTCCGCACTTGCTGCCGCCGACGAACGTGTCGCCGATGCCGAGCGCGACGCCGAGCGGGCGCAGACACTTCTCGCCGGACGCGCGATATCGCGCGAGGCGCTCGACAAGGCGACGCTCGCCGTCGAGCTCGCGCGCCGCCAGCACGAACAGGTCGCCGAGCAGCTCGCGCTGCTCGAGAAAGGGCCGCGCCCCGAGCGCATCGCCGCCGGACGCGCTCAGCTCGCGCAGGCCGAAGCGGCCGTCTCGACCCTCGATGCGACGCTCGCCAACGCCCGCATCACCGCCCCCTTTGCCGGCATCGTCACGGTGCGCCACCGCGAACCGGGCGAGATCGTCGCCGCCGGGTCGGCGGTCCTCACGCTGATGAATCCCGACGACCGCTGGGTGCGGATCTACGTGCCCGAGAACCGGCTCGGCAGGGTCACTATCGGCCAGCCGGCGGAGATCACCTCCGACACCTTCCCGGCACGGCGCTACGACGGCACGGTCTCGTTCATCGCCAGTGCGGCCGAGTTCACGCCCAAGAACGTGCAGACCGCCGAGGAACGGGTCAAGCTCGTCTACGCGGTGAAGGTGCAGATCACCGGCGACCCGGCCGAAGAGCTCAAGCCCGGCCTCCCCGCCGACGTCAGGCTGGTGGAGGCGCGGTGA
PROTEIN sequence
Length: 334
MSPKRIIPRALIVLLLGLGGYALWHFVLAPPADVNGLVASGTVEATAAQLGFQAPGRIALLAPREGDRVAAGDELARLDVSELAARRAQALAQVEAVRAQLDELLAGSRHEELSQGRSALAAADERVADAERDAERAQTLLAGRAISREALDKATLAVELARRQHEQVAEQLALLEKGPRPERIAAGRAQLAQAEAAVSTLDATLANARITAPFAGIVTVRHREPGEIVAAGSAVLTLMNPDDRWVRIYVPENRLGRVTIGQPAEITSDTFPARRYDGTVSFIASAAEFTPKNVQTAEERVKLVYAVKVQITGDPAEELKPGLPADVRLVEAR*