ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_46223_4

Organism: PLM4_65_b1_sep16_Acidobacteria_68_8

near complete RP 42 / 55 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(3005..3205)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Q1_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 63.0
  • Bit_score: 105
  • Evalue 1.10e-20
Cold-shock protein DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 65.0
  • Bit_score: 109
  • Evalue 3.60e-22
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:AHG89451.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 65.0
  • Bit_score: 109
  • Evalue 1.80e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 201
ATGAAGGGCACCGTGAAGTGGTTCAACGCCGAGAAGGGCTTTGGTTTCATCACGCGCGAAGATGGAGAGAAGGACTGTTTCGTCCACCACACGGCGATCGCCGGCGAGGGCTACAAGAGCCTGAACGACGGCGAAGCGGTCGAGTTCGACATCGTGCAGGGCCCAAAGGGCCCGGCCGCGGCGAACGTCCGGCGTCTCTAA
PROTEIN sequence
Length: 67
MKGTVKWFNAEKGFGFITREDGEKDCFVHHTAIAGEGYKSLNDGEAVEFDIVQGPKGPAAANVRRL*