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PLM4_65_coex_sep16_Anaerolinea_thermophila_51_26

PLM4_65cm_coex_sep2016_Chloroflexi_51_26
In projects: PLM4_65cm_coex_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Chloroflexi  →  Bacteria

Displaying items 251-300 of 424 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM4_65_coex_sep16_scaffold_5508
Phylum: Chloroflexi (85.71%)
7 7342 bp 49.06 24.88 94.47
PLM4_65_coex_sep16_scaffold_7790
Order: Anaerolineales (57.14%)
7 6007 bp 50.52 24.92 94.29
PLM4_65_coex_sep16_scaffold_13291
Phylum: Chloroflexi (71.43%)
7 7139 bp 51.84 23.97 78.75
PLM4_65_coex_sep16_scaffold_10053
Domain: Bacteria (57.14%)
7 5193 bp 49.16 24.35 60.43
PLM4_65_coex_sep16_scaffold_3118
Phylum: Chloroflexi (57.14%)
7 10126 bp 47.27 24.28 86.07
PLM4_65_coex_sep16_scaffold_6674
Phylum: Chloroflexi (57.14%)
7 6576 bp 50.70 27.74 91.10
PLM4_65_coex_sep16_scaffold_7054
Species: RBG_16_Chloroflexi_51_16_curated (57.14%)
7 6366 bp 51.43 28.63 85.91
PLM4_65_coex_sep16_scaffold_6424
Order: Anaerolineales (71.43%)
7 6722 bp 50.52 27.42 92.12
PLM4_65_coex_sep16_scaffold_9259
Phylum: Chloroflexi (71.43%)
7 6175 bp 49.09 23.37 94.88
PLM4_65_coex_sep16_scaffold_7880
Species: CG_Anaero_04 (57.14%)
7 5973 bp 50.53 28.38 97.69
PLM4_65_coex_sep16_scaffold_29568
Phylum: Chloroflexi (71.43%)
7 5734 bp 51.10 26.37 81.93
PLM4_65_coex_sep16_scaffold_5639
Phylum: Chloroflexi (85.71%)
7 7246 bp 52.68 28.98 96.72
PLM4_65_coex_sep16_scaffold_10424
Species: RBG_19FT_COMBO_Chloroflexi_62_14_curated (85.71%)
7 5089 bp 50.50 25.85 93.55
PLM4_65_coex_sep16_scaffold_5405
Phylum: Chloroflexi (100%)
7 8607 bp 50.10 27.85 90.73
PLM4_65_coex_sep16_scaffold_10447
Phylum: Chloroflexi (85.71%)
7 5082 bp 48.74 16.68 81.29
PLM4_65_coex_sep16_scaffold_14989
Phylum: Chloroflexi (85.71%)
7 5643 bp 51.28 23.50 99.47
PLM4_65_coex_sep16_scaffold_12156
Phylum: Chloroflexi (71.43%)
7 7908 bp 48.84 27.98 84.18
PLM4_65_coex_sep16_scaffold_2602
Order: Anaerolineales (57.14%)
7 11131 bp 51.66 25.95 92.71
PLM4_65_coex_sep16_scaffold_4878 7 7877 bp 49.27 26.47 89.84
PLM4_65_coex_sep16_scaffold_7464
Phylum: Chloroflexi (57.14%)
7 6166 bp 50.96 27.71 96.04
PLM4_65_coex_sep16_scaffold_3044
Phylum: Chloroflexi (71.43%)
7 10255 bp 52.38 25.54 91.39
PLM4_65_coex_sep16_scaffold_16534
Order: Anaerolineales (57.14%)
7 8704 bp 50.82 21.87 84.38
PLM4_65_coex_sep16_scaffold_3320
Domain: Bacteria (100%)
7 15970 bp 49.16 24.87 87.90
PLM4_65_coex_sep16_scaffold_10769
Domain: Bacteria (57.14%)
7 7234 bp 49.54 24.26 66.02
PLM4_65_coex_sep16_scaffold_18866
Domain: Bacteria (71.43%)
7 4591 bp 51.10 29.86 95.01
PLM4_65_coex_sep16_scaffold_3578
Phylum: Chloroflexi (85.71%)
7 10521 bp 51.69 26.76 95.58
PLM4_65_coex_sep16_scaffold_36056
Phylum: Chloroflexi (100%)
6 3457 bp 52.04 25.73 91.73
PLM4_65_coex_sep16_scaffold_9680
Phylum: Chloroflexi (50%)
6 5307 bp 50.95 26.94 92.09
PLM4_65_coex_sep16_scaffold_22233
Domain: Bacteria (50%)
6 4241 bp 50.67 22.18 66.92
PLM4_65_coex_sep16_scaffold_11209
Phylum: Chloroflexi (66.67%)
6 5351 bp 48.22 22.73 84.43
PLM4_65_coex_sep16_scaffold_3371
Order: Nostocales (50%)
6 10359 bp 48.73 28.48 91.14
PLM4_65_coex_sep16_scaffold_25809
Phylum: Chloroflexi (66.67%)
6 4135 bp 49.75 20.35 69.87
PLM4_65_coex_sep16_scaffold_21178
Phylum: Chloroflexi (66.67%)
6 5179 bp 48.83 18.04 93.78
PLM4_65_coex_sep16_scaffold_9202
Order: Anaerolineales (50%)
6 5460 bp 50.27 29.92 94.84
PLM4_65_coex_sep16_scaffold_9971
Phylum: Chloroflexi (50%)
6 5215 bp 52.41 27.21 92.16
PLM4_65_coex_sep16_scaffold_28796
Domain: Bacteria (50%)
6 5693 bp 49.71 23.87 54.22
PLM4_65_coex_sep16_scaffold_19342
Phylum: Chloroflexi (50%)
6 3538 bp 50.71 25.90 93.19
PLM4_65_coex_sep16_scaffold_12300
Class: Anaerolineae (50%)
6 4616 bp 50.43 27.88 89.69
PLM4_65_coex_sep16_scaffold_18457 6 3638 bp 51.79 29.98 72.57
PLM4_65_coex_sep16_scaffold_8065
Phylum: Chloroflexi (50%)
6 5901 bp 49.14 25.06 88.51
PLM4_65_coex_sep16_scaffold_24514
Domain: Bacteria (66.67%)
6 6471 bp 49.67 24.97 86.23
PLM4_65_coex_sep16_scaffold_5593
Species: RBG_19FT_COMBO_Chloroflexi_62_14_curated (50%)
6 7272 bp 50.44 32.45 96.86
PLM4_65_coex_sep16_scaffold_59931 6 2806 bp 50.07 25.18 92.80
PLM4_65_coex_sep16_scaffold_9763
Order: Anaerolineales (50%)
6 6358 bp 52.86 26.78 95.45
PLM4_65_coex_sep16_scaffold_10650
Phylum: Chloroflexi (66.67%)
6 6108 bp 50.11 19.79 89.19
PLM4_65_coex_sep16_scaffold_31667
Phylum: Chloroflexi (66.67%)
6 3139 bp 48.52 22.17 93.18
PLM4_65_coex_sep16_scaffold_18500
Phylum: Chloroflexi (66.67%)
6 5058 bp 50.47 24.91 94.90
PLM4_65_coex_sep16_scaffold_8616
Class: Anaerolineae (50%)
6 5679 bp 50.48 24.51 90.54
PLM4_65_coex_sep16_scaffold_21784
Domain: Bacteria (100%)
6 3306 bp 49.91 24.73 82.94
PLM4_65_coex_sep16_scaffold_6770
Species: GWC2_Chloroflexi_49_37_curated (50%)
6 6513 bp 46.91 26.09 90.56
Displaying items 251-300 of 424 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.