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PLM4_65_coex_sep16_scaffold_12913_8

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_54_17

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(5350..6204)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8H8_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 276.0
  • Bit_score: 422
  • Evalue 2.30e-115
RNA polymerase sigma 70 similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 284.0
  • Bit_score: 423
  • Evalue 3.70e-116
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 284.0
  • Bit_score: 423
  • Evalue 1.90e-115

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Taxonomy

Geobacter pickeringii → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
GTGAACATTAGAGTGCCGGCCATATCCGACAATTTGACACATTATCTGGCAGAAATACATAAGTTCCCGGTTCTCTCCGCCGAAGAGGAGTACCGGTTCGCCGTCAAATTCTACGAAGAGAAAGACCTGGAATCAGCTCATCATCTGACCACCTCGAATCTGCGATTTGTGGTGAAGATTGCTGCGGAATACAGATCCTACGGGATGAAAATGCTCGATCTGATTCAGGAAGGAAATGTCGGGCTGATGATGGCGGTTCGCAAATTCAATCCCTTTAAGGGGTTCCGTCTTATTTCCTATGCGGTATGGTGGATTCGCGCCTATATCCATAATTACATCATTTCCACCTGGAGCCTGCTCAAAATCGGCACGACCCAGGCCCAGAAAAAGCTGTTCTTTAAACTGAACCAGGCGAAAAATGCCATCAAGAGATTGACCGGGGACGACGACCTGGAAGCGACGGCCCTCTCGCTTGACGTCAAGGAAACCGAAGTTGAGGAAATGGAGCAGAGGATGCGTGGGGATTGCTCCCTGGATGCCGAGGTCATTGACGGTGAAGGGTTTACCCTGCTGGAGAATCTTGTCGACGACAGGCCAAACCAGGAAGAACTGCTTGGTGATCTCCAGGAACATGTATTGCTCCGTAAAGAAATTACCCAGGCGCTAACCGGGCTGAATGAAAAGGAAAGGTATGTCATTGAACAGCGAGTGACCGCGGATCCTCCTTTGACATTGCAGGAAATCGCCGACCATTTCTCCTTGTCGCGTGAAAGGGTGCGTCAGATTGAGGAAGGAGCGCTGAAAAAAATGCATACCGCTCTCATTCCTTACATAACCATGACCAATCCGGCGTGA
PROTEIN sequence
Length: 285
VNIRVPAISDNLTHYLAEIHKFPVLSAEEEYRFAVKFYEEKDLESAHHLTTSNLRFVVKIAAEYRSYGMKMLDLIQEGNVGLMMAVRKFNPFKGFRLISYAVWWIRAYIHNYIISTWSLLKIGTTQAQKKLFFKLNQAKNAIKRLTGDDDLEATALSLDVKETEVEEMEQRMRGDCSLDAEVIDGEGFTLLENLVDDRPNQEELLGDLQEHVLLRKEITQALTGLNEKERYVIEQRVTADPPLTLQEIADHFSLSRERVRQIEEGALKKMHTALIPYITMTNPA*