ggKbase home page

PLM4_65_coex_sep16_scaffold_12678_3

Organism: PLM4_65_coex_sep16_Rokubacteria_70_16

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 8 / 38
Location: comp(3715..4413)

Top 3 Functional Annotations

Value Algorithm Source
High-affinity nickel-transporter bin=GWD2_Deltaproteobacteria_55_8 species=Desulfotomaculum carboxydivorans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 225.0
  • Bit_score: 214
  • Evalue 7.60e-53
high-affinity nickel-transporter similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 231.0
  • Bit_score: 204
  • Evalue 1.70e-50
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.8
  • Coverage: 225.0
  • Bit_score: 216
  • Evalue 3.70e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_57_22 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
GTGGATACCTCGCTGATCGCGGCGCTCGGGCTCGGCTTCCTCCTCGGCGTGCGCCACGCTCTGGACGCCGATCACGTGGCCGCCATGTCGACGTTCGTCAGCCAGGACCGCAGCGTGCTGCGCTCGTGCCTGCGCGGAACGTTCTGGGGTATCGGGCACACGGCGGCCCTGCTGGCGGCCGGCGTCGCGGTCGTCGCGTTCAAGCTGCAGATCTCGCCGGCGCTCGAGCAGGGCATCGAGCGCGTGGTGGGCCTGGTGCTCATCCTGCTCGGCGGGCACGTGCTGCTGCGCACGCTCGGCGCCGTCAGCCTGCATCGGCACGAGCACTCGCACGGGGGCGCCCCCCACAGCCACGTGCACGTGCACGTGGGGGACGGCGACGAGCACCGCCACTTCCACCCCTGGCGCGGCGCGCCCCAGCCGCTGCTCATGGGCCTGCTCCACGGCCTGGCCGGCAGCGGCGCCCTGATCCTCCTCGTGCTCACGACGATGCCGTCGCCGACCGCCGCCGTGCTCTACATCCTGGTGTTCGGCGTCGGCTCGACCGCCGGCATGCTGGTCCTCAGCGGACTGATCGGCGTGCCGTTCGCGCTCACGACCGGCAGCTCTCGAACCCTCACGATGTCCCTCCAGCTCGTCGTGGGAGCCGCCAGCGTCCTCGTCGGCCTCCTGATGCTCCGCGGCATGCTCAGCGGCTAG
PROTEIN sequence
Length: 233
VDTSLIAALGLGFLLGVRHALDADHVAAMSTFVSQDRSVLRSCLRGTFWGIGHTAALLAAGVAVVAFKLQISPALEQGIERVVGLVLILLGGHVLLRTLGAVSLHRHEHSHGGAPHSHVHVHVGDGDEHRHFHPWRGAPQPLLMGLLHGLAGSGALILLVLTTMPSPTAAVLYILVFGVGSTAGMLVLSGLIGVPFALTTGSSRTLTMSLQLVVGAASVLVGLLMLRGMLSG*