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PLM4_65_coex_sep16_scaffold_18070_1

Organism: PLM4_65_coex_sep16_Methylomirabilis_oxyfera_66_7

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 ASCG 10 / 38 MC: 1
Location: comp(2..301)

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate TRAP-T family tripartite ATP-independent periplasmic transporter, membrane protein bin=GWC2_Methylomirabilis_70_16 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 99.0
  • Bit_score: 117
  • Evalue 5.50e-24
TRAP-type transport system permease DctM subunit similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 100.0
  • Bit_score: 113
  • Evalue 2.20e-23
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 100.0
  • Bit_score: 144
  • Evalue 5.80e-32

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Taxonomy

R_NC10_66_22 → NC10 → Bacteria

Sequences

DNA sequence
Length: 300
GTGGCTGCGCTGGTCCTCTGCATCATGCTGCTGTTCTTCGCGGTGGGGATGCCGGTGGCCTTCGCCATGGGGGTCAGCTCCCTGGTGTATATGCTCGTGGACGGCCGGGTCCCCCTGATCTCCATCCCCCAGCGCATGCTGAACGGCGCCGATAACTTTCCCCTGCTAGCGATCCCGTTCTTCATGCTGGCGGGATCACTGATGAACACGGGCGGGGTGACCCGGCGCCTGGTGGACTTCTCCTCGGCCCTGGTGGGGCACATCACCGGGGGGCTGGCCCACGTCGTCGTGGTGGCCAAC
PROTEIN sequence
Length: 100
VAALVLCIMLLFFAVGMPVAFAMGVSSLVYMLVDGRVPLISIPQRMLNGADNFPLLAIPFFMLAGSLMNTGGVTRRLVDFSSALVGHITGGLAHVVVVAN