ggKbase home page

PLM4_65_coex_sep16_scaffold_743_6

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: comp(4404..5747)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma-54 specific, transcriptional regulator, Fis family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G503_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 446.0
  • Bit_score: 713
  • Evalue 7.70e-203
two component sigma-54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 446.0
  • Bit_score: 713
  • Evalue 2.20e-203
Two component, sigma-54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABQ26871.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 446.0
  • Bit_score: 713
  • Evalue 1.10e-202

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1344
ATGAGAGCGCTGGTAATCGATGATGAACCCGGCATCAGGCTGGCGCTGAGCCATTTCCTCACCGGCCGCGGCTATGACGTGTTTCAAGCTGCAACAGGGGCGGAAGGTCTTGCCGTGGCGCAATCGGTCTTGCCTGACATAGTTTTTCTCGATCAGCGGCTTCCCGATATGGAGGGGGAGGACCTTCTCCACCCCCTCACTGCGCCGGAGGTCGGGTCGAGTGTGGTGATGATGACCGCTTATGTGGAACTCGACAAGGCTGTTCAGGCCATGAAAAACGGCGCAGCATACTATTTCCCCAAGCCTCTTGAGCTGGAACAGGTTGCCGTTATTCTGGAGAGGCTGGAAGAGCGGTTGAAAGTAACGCATGAGGTTGAGCACTTCAGAAAACTTAACGGGGCGGAATGCGGCGAAGAAGGCATAATTGGCGAGTCTCCGCATATTATGAAGACCCAGCGATTGATCTCCCTGCTGGCGCAAAACAGTGCCACGCCGGTTTTGATCCTCGGTGAATCGGGGAGCGGCAAGGAACTGGTGGCCAAGTCCATCCACTCCCAGAGTGGCGCAACCGGCCCGCTCGTGGAGATCAACTGTGCTTCGCTTTCGGAAAACCTTCTTGAGTCGGAACTCTTTGGCCATGAAAGAGGCGCGTTTACCGATGCCAGGGAAACCAAGGTCGGCTTGTTTGAAGTAGCCGCTTCCGGCTCAATTTTCTTTGACGAGCTGGCGGAAATGCCGCTTTCCATTCAGGCAAAACTGCTGAAGGTCCTTGATTCAAGAACTTTCAGGAGGGTGGGAGGGGTGACCGACATCAAGAGCAGCGCCCGGTTCATGGCCGCTACAAACAGGGATGTTGCTGCTATGGTCGGGAAAGGATTATTCCGTGAGGACCTCTACTACCGGATCAATGTGTTACCGATAACCGTTCCTCCGTTACGGGAGAGAGGGCGGGATGTGGTTATCCTGGCCGACTATTTTCTCAGGCGAATCGGTGTAAGCATGGGCAAGGGGAACGTCGGGATATCCCCGGAGGCAATGGGCTATCTCCTCAGCTACACCTGGCCGGGAAATGTGAGAGAACTGAAAAATATCATCGAACGGGCACTCATACTGGCTCCCGCCACGGAGATACTCCCCGGTCATCTCCCTCTGGAAATCAGGCAGAATAAGTCCTTGCCGGCTGTTTCCGCCGGCACTGCACGACTGCGTCCCCTCTACGAAGTCGAGGATGAGTACATCACCCAGATTCTGCAGATTACCGGTAACAACCATTCCCGTACCGCGGCAATCCTCGGGATAAGCCGTTCAACCCTTCTGGCCAAACTAAAAAAGATGCAGCTGTAG
PROTEIN sequence
Length: 448
MRALVIDDEPGIRLALSHFLTGRGYDVFQAATGAEGLAVAQSVLPDIVFLDQRLPDMEGEDLLHPLTAPEVGSSVVMMTAYVELDKAVQAMKNGAAYYFPKPLELEQVAVILERLEERLKVTHEVEHFRKLNGAECGEEGIIGESPHIMKTQRLISLLAQNSATPVLILGESGSGKELVAKSIHSQSGATGPLVEINCASLSENLLESELFGHERGAFTDARETKVGLFEVAASGSIFFDELAEMPLSIQAKLLKVLDSRTFRRVGGVTDIKSSARFMAATNRDVAAMVGKGLFREDLYYRINVLPITVPPLRERGRDVVILADYFLRRIGVSMGKGNVGISPEAMGYLLSYTWPGNVRELKNIIERALILAPATEILPGHLPLEIRQNKSLPAVSAGTARLRPLYEVEDEYITQILQITGNNHSRTAAILGISRSTLLAKLKKMQL*