ggKbase home page

PLM4_65_coex_sep16_scaffold_1875_17

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: comp(20401..21699)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane efflux protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M1S2_GEODF similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 427.0
  • Bit_score: 635
  • Evalue 3.40e-179
outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 427.0
  • Bit_score: 635
  • Evalue 9.50e-180
Efflux pump, RND family, outer membrane protein {ECO:0000313|EMBL:ACM19218.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 427.0
  • Bit_score: 635
  • Evalue 4.70e-179

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geobacter daltonii → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1299
TTGGGAACAACTGTTTATGCAAGAGGAGCGCGGCTCCTTGTGCCCGGCATGCTTTGTCTTCTTGTATCATCTCCGCTGTGGGCGGAGACGCAAAAGCTGGCACTGCCGCAAGTAGTCGAGTTTTCGTTACAGAATAATGGTGACCTCAAATCGTTCCGTGAAGATAAAGGGATCCTTGACGCCGGTAAAACCAGGGCGGGACTCCTGCCCAATCCCACCCTTGAACTGGAAGGGGGCACGGGGGCATTAACCGGCAGCAGCGCCGAAAACAGCCTGTCGCTAGGGGTGTCACAAGAATTCTTCCTGGCGGGAAAACGGGAGAAACGGCTCACCATCGCCGAACGGGAACTGGAAATGTACCGCTGGCAGGTGGCTGATCGTGAGAGAGTGCTACGCGAAGAGGTGAAGACGGCATTCTATGATCTCATCCTGGCAGAGCAGCGGCTCATATTGTCAGATCGTTTTATTGCGCTCAATCGCCAGCTCCTTGATGTGACGAAGGATCGATTGGCGGTGGGAGATATTCCGGAACTGGAAATGAACCTGGTCAAAGTGGAACTGGCTAGGAGCGAAGGCGCAAGAATTGATGTCGAAAAAGCGCTGAACCAGAATCAGGCAAAACTCTGGACGCTCATGGGGCTTCCTCTGGGCGAATACCCAGCGATTGTCTGGGCTATTGAGTCTGAAATCTCCATGACAAAGAACCTGGCAGATTTGAAACAACTGGCCCACGGGAAGCGCCCGGACCTCAAGGCCCTGGAGGCGGAGAAAAGCCGGGGTGAATCAGATATTATCCTTGCTCAGTCCGAATTCATCCCAAACCTCACCGCTGGTCTTGCTATCAAACGTGACACAACATCCATGGAGATCGGCGGAATTGAGGGCAAAGACACGGCCTATACCATAGGATTGAAGCTGTCGATGCCTATCCCGGTTTTCGACAAGAATCAGGCTGGTGTTCAGGAAGCCAGGGCCAAAAGAAACAGTACTGAAAGCCGTTTCACGGCAGCCACCAGGAACGCCGAACGGGAAGTAGAGACTGCCTATGCCAGTTTGCTGAACGCCGAAAAGGTTCTTTCTCTCTACAAAACCAACATCATTCCCCAGCTTGAAGAAAACCTGGAACTGACCCAGGAAGCCTATCGTCTCGGTGAGGTCGGCATTCTGGCCGTCATCCAGGAACAGAAGAAATTCTTCGAAATCAACGACGGCTATCTGACGGCACTGCATGATCGTCAGGCAGCCCTTGTGAAGCTTGAAACAGCAGTGGCAACAGAACTTACCGGAGGTGTGCAGTGA
PROTEIN sequence
Length: 433
LGTTVYARGARLLVPGMLCLLVSSPLWAETQKLALPQVVEFSLQNNGDLKSFREDKGILDAGKTRAGLLPNPTLELEGGTGALTGSSAENSLSLGVSQEFFLAGKREKRLTIAERELEMYRWQVADRERVLREEVKTAFYDLILAEQRLILSDRFIALNRQLLDVTKDRLAVGDIPELEMNLVKVELARSEGARIDVEKALNQNQAKLWTLMGLPLGEYPAIVWAIESEISMTKNLADLKQLAHGKRPDLKALEAEKSRGESDIILAQSEFIPNLTAGLAIKRDTTSMEIGGIEGKDTAYTIGLKLSMPIPVFDKNQAGVQEARAKRNSTESRFTAATRNAEREVETAYASLLNAEKVLSLYKTNIIPQLEENLELTQEAYRLGEVGILAVIQEQKKFFEINDGYLTALHDRQAALVKLETAVATELTGGVQ*