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PLM4_65_coex_sep16_scaffold_3394_9

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: comp(8875..10233)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 418.0
  • Bit_score: 692
  • Evalue 2.60e-196
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8K5_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 418.0
  • Bit_score: 692
  • Evalue 1.90e-196
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 418.0
  • Bit_score: 692
  • Evalue 5.30e-197

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Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1359
ATGCTACTTTCCACATTGATAAAAGCCGTTATGCCGTTCGAAACCGGCGATAATGCTGACCTGGAGATTGCCGGTCTTCACTACGATTCCCGCAAGGTGAAGCCCGTCTCCGGCTTCCCGACCGCCAGCCTGCCGCTTGTCGGCATTACCGGGACCAACGGCAAGACCACCACAACCTACCTGGTCGAGGCGATTCTGGAGAAGAGCGGTATCCCTACAGCCGTGTTGGGTACGGTCAATTACCGCTTTCGGGAGAGGGCCATCCCTGCCCCTAACACAACACCTGAATCCGTTGATTTGCAGCAGACCTTAAGGGAATTGATCGATCTGGGAGCCCGCGGTGTCGTTATGGAGGTTTCCTCCCATGCCCTGCAGCAGCGGCGGGTTGATGGCTGCTGTTTCGATGTTGCCATCTTTACCAACCTGACCCGCGACCACCTGGATTACCATCTCGATATGGAGTCGTATTTTCAGAGCAAGCTGCGGCTCTTTTCGGAACTCCTCAATGCAGATCAGACAAAACCGAAGCGTCGCGCGGTGGTGAATGTCGACGACCCGTACGGCCCGCGCATCGTGGCGGGGTCGGCCTGCCCCGTCATCAGCTATGGCCTTTCCGGGACTGCCGATGTCCGTGCCGACCAGGTGAAGTTCTCGGTTGACGGCATCTGCTGCGTTCTGGTGACGCCTCAGGGTAACATCAATCTCCATTCTGCGCTTTTGGGCCGCTTCAACCTCTATAACATTCTCTCGGCAGCGGCAGCCGGAATCGCCATGGACCTGCCGCTTGACGTAATCCGTGAGGGAATTGAGCATCATGGCAACGTCCCGGGCCGGATGGAGCGGATTGCCAATCACCTCGGCCTCACCGTACTCGTTGACTACGCCCACACCGGTGATGCCCTGGAGAATGTGTTGCGTACCCTGACCGAGCTGAAAGAAGAGCGGATTATAACGGTCTTTGGCTGCGGAGGCGACCGGGACCGGGGAAAACGGCCGGTAATGGGTGAGATCGCGGCCCGCTCCAGTGATTTGTGCGTCATAACTTCTGACAACCCCCGCAGTGAGCAGCCGCAGTCAATCATTGCGGAAGTGCGGAGCGGCATTGACCTACTCGGTATAAGGGAATACGCATCTGCGGAGTTGTCCCACGGGTTTAGTGAAAAAGGGTTTGTCGCCGTAGAGTCACGCCACGAGGCGATCAGGCTGGCGGTAAAGGCGGCACGGCCGGGAGACATTATTCTGTTGGCCGGCAAAGGGCATGAAGACTACCAGATAATCGGCAGTGAAAAACTCCATTTCGACGACCGGGAAGAGGCGGCCCGGGCCTGTCGGGAGTTTGCCGTTCAAGTGAAGGACTGA
PROTEIN sequence
Length: 453
MLLSTLIKAVMPFETGDNADLEIAGLHYDSRKVKPVSGFPTASLPLVGITGTNGKTTTTYLVEAILEKSGIPTAVLGTVNYRFRERAIPAPNTTPESVDLQQTLRELIDLGARGVVMEVSSHALQQRRVDGCCFDVAIFTNLTRDHLDYHLDMESYFQSKLRLFSELLNADQTKPKRRAVVNVDDPYGPRIVAGSACPVISYGLSGTADVRADQVKFSVDGICCVLVTPQGNINLHSALLGRFNLYNILSAAAAGIAMDLPLDVIREGIEHHGNVPGRMERIANHLGLTVLVDYAHTGDALENVLRTLTELKEERIITVFGCGGDRDRGKRPVMGEIAARSSDLCVITSDNPRSEQPQSIIAEVRSGIDLLGIREYASAELSHGFSEKGFVAVESRHEAIRLAVKAARPGDIILLAGKGHEDYQIIGSEKLHFDDREEAARACREFAVQVKD*