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PLM4_65_coex_sep16_scaffold_4456_10

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: comp(10096..10581)

Top 3 Functional Annotations

Value Algorithm Source
peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 161.0
  • Bit_score: 278
  • Evalue 6.40e-73
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 161.0
  • Bit_score: 278
  • Evalue 3.20e-72
Peptide deformylase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9R0_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 161.0
  • Bit_score: 278
  • Evalue 2.30e-72

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Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
GTATACCCACACCCGATCCTCAAAAAAATCAGCCGAGCGGTGGATGCCATTGACGCCGAGATAACGGGCCTCCTCCAGGACCTGCTCGACACGATGCGGGCCGGCCCCGGCTCCGTCGGGGTGGCGGCCCCCCAGATAGGCGTCACCCTCCGCGTCTGCGTGGTGGATGTCTCGGCCAGCAGGCAGGGCAAGGAGAACAACCACGGACTGCTCTTCATGATCAACCCGGAAATCACGACCCGGCGGGGAAGCGCCTACATGCGGGAAGGGTGCATGAGCGTCCCGGACTATACCGGCGATGTGGAACGGGCCACTGAGATAACGCTCCGCTTCACCGACGGTGACGGCTCCCGCCACGAGATTACCGCTTCCGGCTTTGAGGCGGTGGCAATTCAGCACGAGATGGACCATCTGGACGGCCTCCTCTTCCTCGACAGGATCACCTCGCTGAAGACCGGCCTCTTCCGGCGGAAAAGCTATAAATAA
PROTEIN sequence
Length: 162
VYPHPILKKISRAVDAIDAEITGLLQDLLDTMRAGPGSVGVAAPQIGVTLRVCVVDVSASRQGKENNHGLLFMINPEITTRRGSAYMREGCMSVPDYTGDVERATEITLRFTDGDGSRHEITASGFEAVAIQHEMDHLDGLLFLDRITSLKTGLFRRKSYK*