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PLM4_65_coex_sep16_scaffold_6782_8

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: comp(5654..6490)

Top 3 Functional Annotations

Value Algorithm Source
dapF; diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 278.0
  • Bit_score: 525
  • Evalue 6.80e-147
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 278.0
  • Bit_score: 525
  • Evalue 3.40e-146
Diaminopimelate epimerase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8E2_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 278.0
  • Bit_score: 525
  • Evalue 2.40e-146

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Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 837
ATGAAATTCACCAAAATGGAGGGCGCCGGCAACGACTACGTTTATGTGAACTGCTTTGCCGAAAAGGTTGAAAATCCGACAGAGGTGGCAATCAAGGTCTCCAACCGCAACTTCGGCATCGGTTCCGACGGGCTCATTCTCATCATGCCATCCGACAAGGCCGACGTCCGCATGCGCATGTTCAACTCCGACGGCTCCGAATCGGAGATGTGCGGCAACGGCATCCGTTGCGTAGCCAAATACGCATACGACCACGGCATCATCGCCAAGAAAGAGATCACCGCCGAAACCGGCGCCGGGATATTAACCCTCCAGCTCTTCACCGATGGGGGCAACAAGGTGGACAAGGTCCGCGTCAACATGGGCAAGCCGCGCCTTACCCGCGGCGAAATCCCCGTGAGCGGCGACCCCGCCGCCAAGGTTATAAACGAGCCGCTCAACATCCTCCACACCACCTTCCACATCACCTGCGCCTCCATGGGCAACCCCCACTGCGTCATCTTCGTCGACGACGTGGAAACCTTCCAGGTGGAGAAGTACGGCCCGCTGATCGAGAATCATGAAATCTTTCCGCGCCGCACCAACGTCGAATTCGTCCAGGTCATCTCCCGCACTGAGGTGCGCCAGCGCACCTGGGAACGGGGCGCGGGAGAGACCCTTGCCTGCGGCACCGGCGCCAGCGCAGTCTGTGTCGCCGGCGTGCTCAACGGCCTTACCGAAAAGAAGATCCTCAACCACCTCTCCGGCGGCGACCTGGAACTGGAATGGGCCGATGACGGCTTCCTCTACATGACCGGCCCGGCGGTGGAAGTGTTCTCCGGCGAAATCCGGATATAA
PROTEIN sequence
Length: 279
MKFTKMEGAGNDYVYVNCFAEKVENPTEVAIKVSNRNFGIGSDGLILIMPSDKADVRMRMFNSDGSESEMCGNGIRCVAKYAYDHGIIAKKEITAETGAGILTLQLFTDGGNKVDKVRVNMGKPRLTRGEIPVSGDPAAKVINEPLNILHTTFHITCASMGNPHCVIFVDDVETFQVEKYGPLIENHEIFPRRTNVEFVQVISRTEVRQRTWERGAGETLACGTGASAVCVAGVLNGLTEKKILNHLSGGDLELEWADDGFLYMTGPAVEVFSGEIRI*