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PLM4_65_coex_sep16_scaffold_14574_4

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: 3161..3895

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 244.0
  • Bit_score: 411
  • Evalue 1.30e-112
tRNA pseudouridine synthase A {ECO:0000255|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000255|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000255|HAMAP-Rule:MF_00171}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 244.0
  • Bit_score: 411
  • Evalue 6.30e-112
tRNA pseudouridine synthase A Tax=Geobacter uraniireducens (strain Rf4) RepID=TRUA_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 244.0
  • Bit_score: 411
  • Evalue 4.50e-112

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Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGCGAAATATCAAACTTATCGTCGAATACGACGGCACCAATTATTCCGGCTGGCAGATCCAGCCCAATGGCCTTGCCATCCAGCAGGTGCTGGAAGAGGCCTTGGCCACCTTGCTTGGTGAGTTCGTCCGGGTCTACTCGTCCGGCCGCACCGATGCCGGTGTCCATGCGCTGGGTATGGTGGCTGCGTTCAGGACCGGGAAGCAGCTGCCGCTGCGTGCCTTTTCCGACGGACTCAACTCGCTCCTGCCGAACGATATCGCCGTCAAGGATGCCGTTGAGGCGCCGCTTGCGTTCAATCCCCGCGCCGATGCAAAGAGCAAGCATTACCGCTATACGATATATAATGGCGGTCGCCGCTCCCCATTGGCGCGTCACCGTTCCTGGCATCTGCGCGGGGCACTTGATCTGGAGCGTATGCAGGCAGCGGCCGCCCATTTCATCGGCGAGCATGACTTTGCTGCCTTTCGCGCCGCCAACTGCGCCGCCAAAACTACGGTGCGCCGTCTTTTCAGCGTGTCCGTTGTCAGGGACGAAGAATCCATCATTGTTGATGTGCACGGTTCGGGATTTTTAAAAAATATGGTCAGGATCATCGCCGGTACTCTCGCAGCGGTCGGCCAGGGGAAAATGAATCCGGCTGTTGTTCCGGAATTGTTCGCTTCCGGCGACAGGGCGTCCGCAGGGAGTACGGCACCTTCCCAGGGGCTCTGCCTCATGGAAGTTTTTTATTGA
PROTEIN sequence
Length: 245
MRNIKLIVEYDGTNYSGWQIQPNGLAIQQVLEEALATLLGEFVRVYSSGRTDAGVHALGMVAAFRTGKQLPLRAFSDGLNSLLPNDIAVKDAVEAPLAFNPRADAKSKHYRYTIYNGGRRSPLARHRSWHLRGALDLERMQAAAAHFIGEHDFAAFRAANCAAKTTVRRLFSVSVVRDEESIIVDVHGSGFLKNMVRIIAGTLAAVGQGKMNPAVVPELFASGDRASAGSTAPSQGLCLMEVFY*