ggKbase home page

PLM4_65_coex_sep16_scaffold_16142_4

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: comp(2193..3197)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix, type 11 domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GB94_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 329.0
  • Bit_score: 585
  • Evalue 1.80e-164
helix-turn-helix, type 11 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 329.0
  • Bit_score: 585
  • Evalue 5.10e-165
Helix-turn-helix, type 11 domain protein {ECO:0000313|EMBL:ABQ25150.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 329.0
  • Bit_score: 585
  • Evalue 2.50e-164

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
GTGCAGAAGGGGAAACCGGCCAAGAAATATTCCCAGGCGGGGCGGGTCCATGACATCATCCGCCTCATCGAGGCCCGCCACGGCATCACCATCGAAGAACTCGCGGAGGAGAGCGGCGTCACCCGCCGCACCATCCACCGCGACCTGATCGCCATCCAGGAGGCCGGCTACCCGCTGGTCTCCGAATGGCTGGATGGGTCCAAGGCCTACCGTTTCCTCACCCGCTTCAAGGACGTCCCCCCGATCAACTTCACCCTCCAGGAACTGATGACCCTCTCCTTTCTCCGCTCCCAGCTGGACATCCTCAAGGGCACCCCTTTTCACGAAGATATGGAAGCCATCTTCCACAAGGTCAATTCGGTGCTTCCCCCCCGCTACGCCGCCCACATGGAGCGGATCGCCAGGGTATCGCTGCCGCTCCTGCAGGGGGGACGCGATTACGCCAGGGTCGCGGAACCGTTGAAGCTCATCCGCGATGCCCTCCTCTACCAGTACCGGCTGACGCTCGGCTATCGGTCTCCCGGCAAGAGGCGAACGACTGACTACCGGGTGGACCCCTACACCCTGATCTTCTACAAGGGGGGGCTCTACCTGCTCGGCTACGCCCATAACCGCAAGGCGCTCCGCACCTTTGCCGTGGAACGGATCAGCAGGGTCGGGGTGGAAAAGGAACGTTTCGAGATGCCCGAGGATTTCCGGCCGGAAAAGCATTTGAAGAGCGCCTTCGGCATAGTGGAAGAAAGGGCCATGGAGGTCACGGTAAGGTTTTCACCCGAAATAGCCCACGCGGTGCGGGACAGGGTCTGGCATCCGTCGCAGAAGCTGAAGCATGAATCTGACGGCAGCGCCGTCATTTCCTTTACTGCGGGGGGGAAAATGGAGATAATCTCCTGGATACTCTCCTACGGCCGCCATGCGGAGGTGCTGGCACCGGCGGATCTGCGGGAAGAGGTGAAGGAAATCGTCACGAAAATGGCGGGGATGTATGGGGCTCAGCTCCGTTGA
PROTEIN sequence
Length: 335
VQKGKPAKKYSQAGRVHDIIRLIEARHGITIEELAEESGVTRRTIHRDLIAIQEAGYPLVSEWLDGSKAYRFLTRFKDVPPINFTLQELMTLSFLRSQLDILKGTPFHEDMEAIFHKVNSVLPPRYAAHMERIARVSLPLLQGGRDYARVAEPLKLIRDALLYQYRLTLGYRSPGKRRTTDYRVDPYTLIFYKGGLYLLGYAHNRKALRTFAVERISRVGVEKERFEMPEDFRPEKHLKSAFGIVEERAMEVTVRFSPEIAHAVRDRVWHPSQKLKHESDGSAVISFTAGGKMEIISWILSYGRHAEVLAPADLREEVKEIVTKMAGMYGAQLR*