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PLM4_65_coex_sep16_scaffold_18971_5

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: 3131..3577

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4S6_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 149.0
  • Bit_score: 256
  • Evalue 1.50e-65
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 149.0
  • Bit_score: 256
  • Evalue 4.10e-66
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 149.0
  • Bit_score: 256
  • Evalue 2.10e-65

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Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 447
ATGGACAATGATGAACTTATGGAAGATTTGACCAGGGACGAGCAGCATAAAGAGCTTGATTTATTCCTGGAGCCTGAACTTGAACCGGATGCTGTTGAGCTTGAGAACGTCGACGAGGTTGAGGAGGCTGAAGAACCTGAGGAGGCTGAGGAGGTTGAAATAAAGGTCGCTGTTGTCGAACATTTCGATGACGCCATAAAACTTTACCTGCGGGAAATCCAGAAAACAAAACTCCTTACCGCTGATGAGGAAAAGGAGCTGGCAGCACGCATCGACAAGGGGGACAAAGCTGCCCGTGACAAGATGATTGAGTCAAACCTCCGGTTGGTGGTCAAGATTGCCAAGCGTTACATCAACCGCGGCCTTCCTTTTCTCGATCTCATTGAAGAGGGAAACATGGGGTTGATCAAGGCCGTGGAGCGCTTCAAGCTTTCCAAGGAATGCCGT
PROTEIN sequence
Length: 149
MDNDELMEDLTRDEQHKELDLFLEPELEPDAVELENVDEVEEAEEPEEAEEVEIKVAVVEHFDDAIKLYLREIQKTKLLTADEEKELAARIDKGDKAARDKMIESNLRLVVKIAKRYINRGLPFLDLIEEGNMGLIKAVERFKLSKECR