ggKbase home page

PLM4_65_coex_sep16_scaffold_21921_2

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: 549..1322

Top 3 Functional Annotations

Value Algorithm Source
Xylose isomerase domain protein TIM barrel Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G934_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 256.0
  • Bit_score: 434
  • Evalue 4.00e-119
xylose isomerase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 256.0
  • Bit_score: 434
  • Evalue 1.10e-119
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ABQ28302.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 256.0
  • Bit_score: 434
  • Evalue 5.60e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGTCTAGCACTGTCTTTGCCCATCTCCCCTATCCGCAGATCTTCCAGCAGTTTGATTACCTCATTGCCGGGAGGATCAACCCGGAGATATTTTTCTCCAGCGACGCCCTCGATGCCGTGATTCCTGAAGAGCTGGCCAGCGTGGCGGAAACTCTTGGCGCAAACGGCCTTAAATGCACCATTCATGCACCCTTCATGGACCTCAACCCCGGTTCGGTGACCCGGCTGATCCGGGACGTCACCCTCCACAGTTTCGGCCAGGTACTGGCCGCGGCCGCCATCCTCAATCCGGAGATAATAGTTTTTCACCCCGGTTATGACCGCTGGCGCTACGGGGACAACCGGGACGCATGGCTGAAGCACAGCGTCGAATCGTGGCAGTGGGTGTTGGAACGCGCCGAGCCGATCGGCTGCGTCGTGGCGGTGGAAAATATCTTCGAGGAGGAGCCGTCAACGCTCCTGGCGCTGATCGAGGCGGTGAATTCGCCCCGGTTTCGCCACTGTTTCGACGTGGGACACTGGAACCTGTTCAAGAAGGTGGGGTTGGAGGAATGGTTTGCTGCGTTGGGGAGCCGCATTGCCGAGGCGCATATCCACGACAACCGCGGCAGCCGGGACGATCACGCCCCGCTCGGCGAGGGGGACATCGACTTCCCACTCTTCTTCAGCCTCATGAAACGTTATGCGCCTCAGGCCGCCTGGACCATCGAGGCCCACAGCCGGGAAAAGCTGGAACGGGCACTCATTAATCTGCAGAACTACTCCACGGAATAA
PROTEIN sequence
Length: 258
MSSTVFAHLPYPQIFQQFDYLIAGRINPEIFFSSDALDAVIPEELASVAETLGANGLKCTIHAPFMDLNPGSVTRLIRDVTLHSFGQVLAAAAILNPEIIVFHPGYDRWRYGDNRDAWLKHSVESWQWVLERAEPIGCVVAVENIFEEEPSTLLALIEAVNSPRFRHCFDVGHWNLFKKVGLEEWFAALGSRIAEAHIHDNRGSRDDHAPLGEGDIDFPLFFSLMKRYAPQAAWTIEAHSREKLERALINLQNYSTE*