ggKbase home page

PLM4_65_coex_sep16_scaffold_28695_1

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: comp(3..719)

Top 3 Functional Annotations

Value Algorithm Source
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 242.0
  • Bit_score: 390
  • Evalue 2.90e-106
Rhomboid family protein bin=GWC2_Geobacteraceae_55_20 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 239.0
  • Bit_score: 390
  • Evalue 8.00e-106
Tax=GWC2_Geobacteraceae_53_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 239.0
  • Bit_score: 414
  • Evalue 5.50e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Geobacteraceae_53_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGGCACAACGGGCAATACTCTGTCCACGCTGCAGACAGCTGATTGGCAGCGCGGAAGCTGCGTGCTCCTGGTGCGGCACCTCCCGCTCAGCGGCGTGGTGGCAGGTGATAAACTGGACACGCGGGGCGCTGGAGGGTGACTGGCTGGTCAAGTCCATCATCACGGTCAACGTGCTGTTCTATGCCATTTCGCTCCTGCTGAGCGCCGGCAGCGGCGGTTTCGGCGGCTTTCTGGCACCGGGACAAACGAGTCTCTTTCTGCTGGGTGCAACCGGCACATTTCCCATCGACCATCACGGCAGGCTCTGGACTCTCATCAGCGCCAATTATCTCCATGGCGGCATTTTGCACATCATTTTCAATCTGATGGCTCTGCGCCAGATTGCACCCTGGGTCGCCAACGAATACGGAGCCAGCCGCATGTTCACCATCTATACCCTGGGTGGCGTCTTCGGCTACTGGGTCTCCTATCTGGCAGGGGTGCCGTTCACTATCGGTGCGTCAGCCGCCGTTTGCGGCCTGATCGGCTCTCTTCTCTTCTTTGGGAAAAGCAGAGGCGGGGTCTACGGTGGTTCGGTGTACCGCGAGGTCGGAGGCTGGGTGATCGGTTTGTTCCTGTTCGGTCTGATAATGCCCGGCATCAACAACTGGGGGCACGGCGGCGGTATCATCGGCGGCATCGTTCTTGGCATGCTGTTGGGGTACAACGATCGCAGA
PROTEIN sequence
Length: 239
MAQRAILCPRCRQLIGSAEAACSWCGTSRSAAWWQVINWTRGALEGDWLVKSIITVNVLFYAISLLLSAGSGGFGGFLAPGQTSLFLLGATGTFPIDHHGRLWTLISANYLHGGILHIIFNLMALRQIAPWVANEYGASRMFTIYTLGGVFGYWVSYLAGVPFTIGASAAVCGLIGSLLFFGKSRGGVYGGSVYREVGGWVIGLFLFGLIMPGINNWGHGGGIIGGIVLGMLLGYNDRR