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PLM4_65_coex_sep16_scaffold_28338_1

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: comp(2..1552)

Top 3 Functional Annotations

Value Algorithm Source
(R)-citramalate synthase {ECO:0000313|EMBL:ABQ26496.1}; EC=2.3.3.13 {ECO:0000313|EMBL:ABQ26496.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 517.0
  • Bit_score: 976
  • Evalue 1.00e-281
(R)-citramalate synthase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3X8_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 517.0
  • Bit_score: 976
  • Evalue 7.40e-282
putative alpha-isopropylmalate/homocitrate synthase family transferase similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 517.0
  • Bit_score: 976
  • Evalue 2.10e-282

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Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1551
ATGAGCCTGGTAAAACTTTATGACACCACACTCCGCGACGGTACCCAAGCGGAGGACATTTCACTCCTGGTTGAGGATAAGATCCGCATAGCCCATAAGCTTGATGAGATTGGTATCCATTACATTGAAGGGGGATGGCCCGGGAGCAATCCAAAGGATGTGACTTTCTTCAAGGACATAAAGAAAGAGAGACTCTCCTCTGCCAAAATTGCAGCCTTCGGCTCAACCCGGCGTGCGAAAATAACCCCTGACAAGGACCAGAATATCCGCACCCTGGTCCAGGCGGAACCCGACGCCATAACCATCTTCGGCAAGACCTGGGACTTTCATGTACGGGAAGCCCTGCGCATCTCGTTAGAGGAAAATCTTGAGTTGATCTTCGATTCGCTGGAATATTTGAAAGCGCGCACCCCCGAGGTCTTTTACGATGCTGAACACTTTTTTGACGGCTATAAAGCCAATGCTGACTATGCCATCAAGACGCTGAAGGCTGCTGAAGAGGCTAAGGTTGACTGCATTGTGTTGTGCGACACCAATGGCGGTACCATGCCGTTTGAATTGGTGGAGATTATCCGGGATGTGAAAAAGTACATCAGGACGCCGCTCGGGATTCATACCCATAATGATTCAGAGTGTGCCGTGGCAAACTCCCTTCACGCCGTCGACCAGGGGATCGTCCAGGTACAGGGGACCATCAACGGTTTCGGCGAACGGTGCGGGAATGCCAATCTTTGCTCCATTATCCCCTCACTGAAACTGAAGATGAAACGTGAGTGCATATCTGACGATCAATTAAAGAAACTGCGTGAATTATCCCGCTTTGTCTATGAACTGGCCAACTTCTCGCCAAACAAGCATCAGCCTTATGTGGGGAATTCCGCCTTTGCACACAAGGGAGGCGTACATGTGAGCGCAATCCAGCGCCACCCCGAAACTTATGAGCATATCAGGCCTGAACTGGTGGGTAACACCACGAGGGTTTTGATCTCTGATCTTTCGGGCCGCGCCAATATTCTCGCAAAAGCTGAAGAATTCAATATAAACCTCGACAGCAAGGACCCCGTGACCCTGGAAATACTTGACAACATCAAGGAGATGGAGAATCGGGGCTACCAGTTTGAAGGTGCGGAGGCGTCCTTTGAACTATTGATGAAGCGGGCACTTGGCACCCATAAAAAATTCTTTTCCGTTATCGGTTTCAGGGTCATCGATGAAAAGCGCCACGAAGATCAGAAGCCTATTTCCGAGGCCACCATTATGGTCAAGGTGGGTGGTAAAGTAGAGCATACAGCTGCGGAAGGTAATGGTCCGGTTAATGCGCTGGATAATGCCATCAGAAAGGCCTTGGAGAAGTTTTATCCAAAGCTTAAAGAAGTCAAGCTACTCGATTACAAAGTTCGTGTCCTTCCTGCTGGACAGGGCACTGCTTCGGCAATTCGTGTTCTCATTGAGTCGGGCGACAAGGAAAGCCGCTGGGGTACTGTTGGCGTGTCAGATAATATCGTCGATGCCTCCTATCAAGCTTTGATAGATGGTATTGAGTACAAACTC
PROTEIN sequence
Length: 517
MSLVKLYDTTLRDGTQAEDISLLVEDKIRIAHKLDEIGIHYIEGGWPGSNPKDVTFFKDIKKERLSSAKIAAFGSTRRAKITPDKDQNIRTLVQAEPDAITIFGKTWDFHVREALRISLEENLELIFDSLEYLKARTPEVFYDAEHFFDGYKANADYAIKTLKAAEEAKVDCIVLCDTNGGTMPFELVEIIRDVKKYIRTPLGIHTHNDSECAVANSLHAVDQGIVQVQGTINGFGERCGNANLCSIIPSLKLKMKRECISDDQLKKLRELSRFVYELANFSPNKHQPYVGNSAFAHKGGVHVSAIQRHPETYEHIRPELVGNTTRVLISDLSGRANILAKAEEFNINLDSKDPVTLEILDNIKEMENRGYQFEGAEASFELLMKRALGTHKKFFSVIGFRVIDEKRHEDQKPISEATIMVKVGGKVEHTAAEGNGPVNALDNAIRKALEKFYPKLKEVKLLDYKVRVLPAGQGTASAIRVLIESGDKESRWGTVGVSDNIVDASYQALIDGIEYKL