ggKbase home page

PLM4_65_coex_sep16_scaffold_31024_1

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: 3..686

Top 3 Functional Annotations

Value Algorithm Source
Surface antigen msp4 family protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G719_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 228.0
  • Bit_score: 315
  • Evalue 3.10e-83
outer membrane channel protein similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 227.0
  • Bit_score: 319
  • Evalue 6.10e-85
Outer membrane channel protein {ECO:0000313|EMBL:AJE02672.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 227.0
  • Bit_score: 319
  • Evalue 3.00e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geobacter pickeringii → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
CTCATCATTATTGCCGCACTCGTAACCCTCGCGCTCCCCGCCATCAGTTCGGCGGCCCCTGCCAGACCTGGCGCCTATGTGTCCGGCTTCCTCGGCGTCACTGTCCCCAGGGACACCGATGTGACGACCGAGCAGTTCCTCCCAACGACCACTTTCAATACTTTCAATGACCGGGTGGAGTTCGATCCCGGCATTAACATCGGCGGTACCGGCGGTTTCGATTTCGGCTTCGTCCGACTGGAGGGGGAACTGTCCTACAAGCATGGGGAGATGACGTCGATTACCGACAGGGATACCGGCGTCCGCTTCCGCAACGTGGACGGCAGTCTCGGGGCGCTGGCCATGATGTTCAACGGCTTCTTCGACCTGCATAACGACACCCCGGTAACCCCCTACTTGGGGGGAGGCATCGGTTTTGCCGCCCTCCATCTGAGTGACACCTTTGGTACCGATACCAGTGGGACAGGAGGTCAATCCCTCCTGTATTTCGAAGACGACGACACCGTCTTTGCCTACCAGGCCGGCGCCGGCCTGGAGATCGCCCTCAACCGGATGCTCTCCCTGGACGTTGGCTACCGTTACTTCGGCACCTCAAAGGCCCACTTCGATTCAGACCCGTTTCAAACGACTGAGATGAAATTCGAGAGCCACAACGCGGCGGTGGGATTCAGGGTGAAATTCTGA
PROTEIN sequence
Length: 228
LIIIAALVTLALPAISSAAPARPGAYVSGFLGVTVPRDTDVTTEQFLPTTTFNTFNDRVEFDPGINIGGTGGFDFGFVRLEGELSYKHGEMTSITDRDTGVRFRNVDGSLGALAMMFNGFFDLHNDTPVTPYLGGGIGFAALHLSDTFGTDTSGTGGQSLLYFEDDDTVFAYQAGAGLEIALNRMLSLDVGYRYFGTSKAHFDSDPFQTTEMKFESHNAAVGFRVKF*