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PLM4_65_coex_sep16_scaffold_31879_1

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: comp(75..413)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 112.0
  • Bit_score: 189
  • Evalue 1.30e-45
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 97.0
  • Bit_score: 159
  • Evalue 5.20e-37
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 112.0
  • Bit_score: 197
  • Evalue 6.50e-48

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Taxonomy

RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGACCAAAAGAACAGTTACAATTTATCCATCTTCGGCGAAAGAGATGACGTCTCTGGGGCAGCGCCTCAAGGATGCGCGGCTGCGCCGTCGCTTTTCCATGGAAACGGTTTGTTCCAGGGCTGATATTTCGCGTCCGACGCTTTACAAGGTCGAGAATGGTGATCCCTCGGTTGCAATCGGGAGCTACGTCCAGGTACTGCGCGTCTTGGGACTGGTTGAAGATTTGTCTTTGATAGCCAAGGAAGATGTTCTGGGGCGCCGTCTGCAAGACGAATCACTTCCCCATAGGAAAAGGGCGCCACGCAAGAAGCCGCTGACAGGGGACAGTGATGGCTAA
PROTEIN sequence
Length: 113
MTKRTVTIYPSSAKEMTSLGQRLKDARLRRRFSMETVCSRADISRPTLYKVENGDPSVAIGSYVQVLRVLGLVEDLSLIAKEDVLGRRLQDESLPHRKRAPRKKPLTGDSDG*