ggKbase home page

PLM4_65_coex_sep16_scaffold_24884_1

Organism: PLM4_65_coex_sep16_Liptonbacteria_48_7

partial RP 36 / 55 MC: 2 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(1..330)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S8 bin=GWC1_OD1_38_17 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 41.1
  • Coverage: 107.0
  • Bit_score: 99
  • Evalue 2.20e-18
rpsH; 30S ribosomal protein S8 similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 107.0
  • Bit_score: 97
  • Evalue 1.40e-18
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.5
  • Coverage: 110.0
  • Bit_score: 132
  • Evalue 2.50e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OD1_56_20 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGTATTACGATTTGATTGTAAAAATTAAAAACGCCGCTCAAGCCAAAAAAGAATCTTTGGTTACCCCTTATTCCAAGATGGATTTTGAGGTTCTGAAGGTGCTGGAAGGTTACGGATACGTGAAATCCGTTTCCAAAAAAGAGGGCGGCAAAAAGAATTTCATAGAAATTAAGCTGGCTTATGAAAACGGAAAACCGCGCATAAGCGATTTTAAGCTTTTGTCCAAGCCCAGCCGCCGCTTTTATACCGGATACAAAGAACTCTCCTCTGTTCGCCAGGGGCAGGGCTTGGCGATTCTATCCACCCCCCAGGGGATTATGTCCAACAGG
PROTEIN sequence
Length: 110
MYYDLIVKIKNAAQAKKESLVTPYSKMDFEVLKVLEGYGYVKSVSKKEGGKKNFIEIKLAYENGKPRISDFKLLSKPSRRFYTGYKELSSVRQGQGLAILSTPQGIMSNR