Consensus taxonomy: Proteobacteria → Bacteria
from PLM4_65_coex_sep16_CONCOCT_75
contig | # features | sequence size | GC content (%) | Cov | Coding Density (%) | |
---|---|---|---|---|---|---|
PLM4_65_coex_sep16_scaffold_34936
Class:
Betaproteobacteria (100%)
|
3 | 2513 bp | 62.99 | 6.57 | 80.46 | |
PLM4_65_coex_sep16_scaffold_34651
Species:
Nitrosomonas communis (50%)
|
2 | 2526 bp | 64.33 | 7.07 | 98.10 | |
PLM4_65_coex_sep16_scaffold_33596
Class:
Betaproteobacteria (100%)
|
5 | 2573 bp | 65.45 | 8.10 | 87.91 | |
PLM4_65_coex_sep16_scaffold_95362
Species:
RLO_Burkholderiales_64_99 (50%)
|
2 | 2631 bp | 62.98 | 6.84 | 96.01 | |
PLM4_65_coex_sep16_scaffold_31955
Class:
Betaproteobacteria (100%)
|
3 | 2648 bp | 63.07 | 8.44 | 98.45 | |
PLM4_65_coex_sep16_scaffold_31731
Species:
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated (75%)
|
4 | 2658 bp | 66.29 | 8.01 | 94.70 | |
PLM4_65_coex_sep16_scaffold_51015
Class:
Betaproteobacteria (60%)
|
5 | 2665 bp | 65.78 | 8.11 | 94.00 | |
PLM4_65_coex_sep16_scaffold_31239
Species:
R_Acidobacteria_59_13 (66.67%)
|
3 | 2682 bp | 65.81 | 8.56 | 98.88 | |
PLM4_65_coex_sep16_scaffold_30674
Species:
Thioalkalivibrio thiocyanoxidans (50%)
|
2 | 2709 bp | 63.34 | 7.42 | 95.24 | |
PLM4_65_coex_sep16_scaffold_29975
Class:
Betaproteobacteria (75%)
|
4 | 2746 bp | 64.38 | 11.31 | 100.73 | |
PLM4_65_coex_sep16_scaffold_110757
Class:
Betaproteobacteria (100%)
|
4 | 2753 bp | 65.71 | 7.57 | 91.65 | |
PLM4_65_coex_sep16_scaffold_29681
Species:
R_Betaproteobacteria_65_24 (50%)
|
2 | 2762 bp | 63.76 | 6.68 | 87.11 | |
PLM4_65_coex_sep16_scaffold_29628
Species:
R_Betaproteobacteria_66_14 (100%)
|
3 | 2765 bp | 63.36 | 6.56 | 94.50 | |
PLM4_65_coex_sep16_scaffold_29278
Species:
Sedimenticola sp. SIP-G1 (50%)
|
2 | 2783 bp | 63.71 | 12.40 | 99.60 | |
PLM4_65_coex_sep16_scaffold_41213
Class:
Betaproteobacteria (66.67%)
|
3 | 2788 bp | 65.93 | 8.98 | 99.00 | |
PLM4_65_coex_sep16_scaffold_28553
Class:
Gammaproteobacteria (75%)
|
4 | 2825 bp | 66.55 | 8.44 | 89.10 | |
PLM4_65_coex_sep16_scaffold_28129
Class:
Gammaproteobacteria (100%)
|
4 | 2849 bp | 65.78 | 7.90 | 78.98 | |
PLM4_65_coex_sep16_scaffold_26238
Class:
Betaproteobacteria (60%)
|
5 | 2964 bp | 63.23 | 10.83 | 82.66 | |
PLM4_65_coex_sep16_scaffold_26179
Class:
Alphaproteobacteria (60%)
|
5 | 2968 bp | 64.66 | 10.61 | 94.71 | |
PLM4_65_coex_sep16_scaffold_56632
Class:
Betaproteobacteria (66.67%)
|
3 | 2987 bp | 66.15 | 8.74 | 101.34 | |
PLM4_65_coex_sep16_scaffold_25530
Species:
R_Betaproteobacteria_66_14 (75%)
|
4 | 3013 bp | 69.60 | 7.97 | 94.89 | |
PLM4_65_coex_sep16_scaffold_64734
Class:
Betaproteobacteria (100%)
|
5 | 3028 bp | 65.69 | 6.79 | 88.18 | |
PLM4_65_coex_sep16_scaffold_40540
Domain:
Bacteria (50%)
|
4 | 3050 bp | 67.08 | 8.02 | 90.10 | |
PLM4_65_coex_sep16_scaffold_24889
Class:
Gammaproteobacteria (100%)
|
4 | 3058 bp | 66.55 | 7.46 | 93.10 | |
PLM4_65_coex_sep16_scaffold_24785
Phylum:
Proteobacteria (55.56%)
|
9 | 3064 bp | 64.98 | 9.50 | 84.69 | |
PLM4_65_coex_sep16_scaffold_24708
Class:
Alphaproteobacteria (50%)
|
4 | 3071 bp | 62.36 | 9.67 | 89.09 | |
PLM4_65_coex_sep16_scaffold_24465
Class:
Betaproteobacteria (75%)
|
4 | 3090 bp | 67.31 | 9.08 | 90.19 | |
PLM4_65_coex_sep16_scaffold_24248
Species:
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (50%)
|
2 | 3106 bp | 64.49 | 10.87 | 96.59 | |
PLM4_65_coex_sep16_scaffold_23673
Class:
Betaproteobacteria (66.67%)
|
3 | 3150 bp | 66.35 | 6.90 | 95.71 | |
PLM4_65_coex_sep16_scaffold_23410
Class:
Betaproteobacteria (50%)
|
6 | 3172 bp | 62.61 | 12.25 | 90.10 | |
PLM4_65_coex_sep16_scaffold_28940
Class:
Betaproteobacteria (50%)
|
8 | 3320 bp | 63.58 | 7.95 | 72.92 | |
PLM4_65_coex_sep16_scaffold_21326
Class:
Alphaproteobacteria (50%)
|
4 | 3345 bp | 67.95 | 6.64 | 100.36 | |
PLM4_65_coex_sep16_scaffold_21298
Class:
Betaproteobacteria (66.67%)
|
3 | 3348 bp | 68.40 | 7.03 | 95.52 | |
PLM4_65_coex_sep16_scaffold_20474
Class:
Betaproteobacteria (50%)
|
4 | 3426 bp | 63.84 | 8.89 | 74.87 | |
PLM4_65_coex_sep16_scaffold_52441
Species:
RLO_Betaproteobacteria_68_20 (50%)
|
6 | 3428 bp | 62.28 | 10.11 | 94.52 | |
PLM4_65_coex_sep16_scaffold_20314
Order:
Xanthomonadales (50%)
|
4 | 3441 bp | 66.00 | 10.33 | 89.97 | |
PLM4_65_coex_sep16_scaffold_39409
Species:
RLO_Betaproteobacteria_68_20 (83.33%)
|
6 | 3450 bp | 66.55 | 7.61 | 90.17 | |
PLM4_65_coex_sep16_scaffold_19111
Class:
Betaproteobacteria (50%)
|
4 | 3562 bp | 64.96 | 9.35 | 74.96 | |
PLM4_65_coex_sep16_scaffold_18508
Class:
Betaproteobacteria (80%)
|
5 | 3633 bp | 65.24 | 8.05 | 97.69 | |
PLM4_65_coex_sep16_scaffold_18416
Class:
Betaproteobacteria (100%)
|
5 | 3641 bp | 66.00 | 11.54 | 88.16 | |
PLM4_65_coex_sep16_scaffold_18232
Species:
RBG_16_Betaproteobacteria_66_20_curated (50%)
|
4 | 3665 bp | 67.91 | 7.82 | 89.39 | |
PLM4_65_coex_sep16_scaffold_18192
Phylum:
Proteobacteria (50%)
|
4 | 3670 bp | 69.26 | 7.07 | 96.73 | |
PLM4_65_coex_sep16_scaffold_26809
Class:
Betaproteobacteria (66.67%)
|
6 | 3688 bp | 65.86 | 8.91 | 83.87 | |
PLM4_65_coex_sep16_scaffold_17801
Class:
Betaproteobacteria (80%)
|
5 | 3717 bp | 63.14 | 7.34 | 85.15 | |
PLM4_65_coex_sep16_scaffold_17596
Order:
Rhodospirillales (60%)
|
5 | 3742 bp | 64.35 | 11.62 | 96.29 | |
PLM4_65_coex_sep16_scaffold_17515
Species:
RLO_Betaproteobacteria_68_20 (50%)
|
4 | 3751 bp | 67.40 | 8.20 | 99.73 | |
PLM4_65_coex_sep16_scaffold_17467
Species:
RLO_Betaproteobacteria_68_20 (50%)
|
4 | 3758 bp | 66.34 | 9.06 | 94.28 | |
PLM4_65_coex_sep16_scaffold_30576
Phylum:
Proteobacteria (83.33%)
|
6 | 3815 bp | 64.04 | 6.53 | 84.85 | |
PLM4_65_coex_sep16_scaffold_21265
Class:
Gammaproteobacteria (60%)
|
5 | 3850 bp | 65.30 | 8.53 | 91.87 | |
PLM4_65_coex_sep16_scaffold_22094
Class:
Betaproteobacteria (100%)
|
4 | 3862 bp | 68.46 | 10.88 | 83.58 |