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PLM4_90_b1_sep16_Deltaproteobacteria_48_13

PLM4_90cm_b1_sep2016_Deltaproteobacteria_48_13
In projects: PLM4_90cm_b1_sep2016  |  ERML-PLM4  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Deltaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 251-300 of 889 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM4_90_b1_sep16_scaffold_5009
Species: RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated (50%)
4 4288 bp 48.30 11.37 89.76
PLM4_90_b1_sep16_scaffold_2429
Class: Deltaproteobacteria (92.31%)
13 10947 bp 47.31 18.96 89.75
PLM4_90_b1_sep16_scaffold_3872
Class: Deltaproteobacteria (50%)
4 4857 bp 53.08 15.13 89.75
PLM4_90_b1_sep16_scaffold_34366
Domain: Bacteria (80%)
5 3213 bp 48.33 6.12 89.73
PLM4_90_b1_sep16_scaffold_420
Class: Deltaproteobacteria (76.92%)
13 15509 bp 45.50 7.52 89.72
PLM4_90_b1_sep16_scaffold_2199
Domain: Bacteria (71.43%)
7 6327 bp 51.81 6.33 89.71
PLM4_90_b1_sep16_scaffold_161
Class: Deltaproteobacteria (64%)
25 27600 bp 48.09 9.26 89.68
PLM4_90_b1_sep16_scaffold_5108
Class: Deltaproteobacteria (100%)
5 6113 bp 50.45 14.53 89.66
PLM4_90_b1_sep16_scaffold_12318
Species: RBG_16_Deltaproteobacteria_48_10_curated (100%)
3 6034 bp 50.18 18.47 89.59
PLM4_90_b1_sep16_scaffold_3569
Species: RBG_16_Deltaproteobacteria_47_11_curated (66.67%)
12 13020 bp 47.76 16.72 89.59
PLM4_90_b1_sep16_scaffold_12142
Class: Deltaproteobacteria (83.33%)
6 5265 bp 45.32 16.15 89.57
PLM4_90_b1_sep16_scaffold_5837
Class: Deltaproteobacteria (100%)
5 4536 bp 46.72 14.48 89.48
PLM4_90_b1_sep16_scaffold_6779
Species: RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated (66.67%)
3 3709 bp 49.45 13.91 89.46
PLM4_90_b1_sep16_scaffold_16156
Class: Deltaproteobacteria (80%)
5 4477 bp 50.06 10.79 89.46
PLM4_90_b1_sep16_scaffold_11673
Species: RBG_16_Deltaproteobacteria_47_11_curated (60%)
5 4394 bp 46.61 7.54 89.44
PLM4_90_b1_sep16_scaffold_14186
Class: Deltaproteobacteria (80%)
5 2557 bp 43.88 7.68 89.40
PLM4_90_b1_sep16_scaffold_8793
Species: RBG_16_Deltaproteobacteria_48_10_curated (57.14%)
7 5991 bp 48.64 15.27 89.38
PLM4_90_b1_sep16_scaffold_11648
Domain: Bacteria (50%)
4 3702 bp 49.78 17.95 89.30
PLM4_90_b1_sep16_scaffold_11955
Species: RBG_16_Deltaproteobacteria_47_11_curated (50%)
2 2792 bp 48.53 18.32 89.29
PLM4_90_b1_sep16_scaffold_4293
Class: Deltaproteobacteria (100%)
9 6462 bp 47.34 16.62 89.18
PLM4_90_b1_sep16_scaffold_2255
Species: RBG_16_Deltaproteobacteria_47_11_curated (85.71%)
7 7068 bp 48.06 19.40 89.18
PLM4_90_b1_sep16_scaffold_14398
Species: RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated (50%)
4 2537 bp 46.87 9.16 89.16
PLM4_90_b1_sep16_scaffold_534
Class: Deltaproteobacteria (92.31%)
13 10993 bp 48.33 16.06 89.16
PLM4_90_b1_sep16_scaffold_20566
Species: RBG_16_Deltaproteobacteria_49_23_curated (60%)
5 3490 bp 46.82 8.51 89.14
PLM4_90_b1_sep16_scaffold_20127
Species: RBG_16_Deltaproteobacteria_47_11_curated (66.67%)
9 4483 bp 46.80 13.28 89.14
PLM4_90_b1_sep16_scaffold_3020
Species: RBG_16_Deltaproteobacteria_47_11_curated (66.67%)
6 5901 bp 47.86 13.14 89.07
PLM4_90_b1_sep16_scaffold_7097
Species: RBG_16_Deltaproteobacteria_47_11_curated (55.56%)
9 6565 bp 48.18 17.68 89.06
PLM4_90_b1_sep16_scaffold_9518
Species: RBG_16_Deltaproteobacteria_49_23_curated (50%)
4 3126 bp 48.85 11.18 89.06
PLM4_90_b1_sep16_scaffold_4750
Class: Deltaproteobacteria (71.43%)
14 11173 bp 46.93 11.67 89.04
PLM4_90_b1_sep16_scaffold_190
Class: Deltaproteobacteria (68.75%)
16 17482 bp 49.84 9.13 89.01
PLM4_90_b1_sep16_scaffold_26926
Species: RBG_16_Deltaproteobacteria_49_23_curated (50%)
4 3030 bp 48.68 15.15 89.01
PLM4_90_b1_sep16_scaffold_11258
Class: Deltaproteobacteria (100%)
3 2877 bp 50.33 8.60 88.95
PLM4_90_b1_sep16_scaffold_3947
Species: RBG_16_Deltaproteobacteria_48_10_curated (75%)
4 4811 bp 48.26 15.84 88.92
PLM4_90_b1_sep16_scaffold_3601
Class: Deltaproteobacteria (58.33%)
12 9143 bp 48.99 9.29 88.92
PLM4_90_b1_sep16_scaffold_11584
Species: RBG_16_Deltaproteobacteria_47_11_curated (50%)
2 2834 bp 45.38 7.62 88.92
PLM4_90_b1_sep16_scaffold_4550
Species: RBG_16_Deltaproteobacteria_47_11_curated (57.14%)
7 5095 bp 48.11 6.86 88.91
PLM4_90_b1_sep16_scaffold_25228
Class: Deltaproteobacteria (75%)
4 2863 bp 47.99 10.90 88.86
PLM4_90_b1_sep16_scaffold_1508
Class: Deltaproteobacteria (84.62%)
13 14137 bp 49.49 19.76 88.75
PLM4_90_b1_sep16_scaffold_7580
Class: Deltaproteobacteria (75%)
4 3506 bp 50.74 7.62 88.73
PLM4_90_b1_sep16_scaffold_7813
Species: RBG_16_Deltaproteobacteria_47_11_curated (50%)
10 7590 bp 47.60 13.95 88.72
PLM4_90_b1_sep16_scaffold_1260
Class: Deltaproteobacteria (100%)
8 8056 bp 47.58 16.42 88.70
PLM4_90_b1_sep16_scaffold_9585
Species: GWC2_Syntrophus_56_31_curated (71.43%)
7 4191 bp 51.94 9.13 88.69
PLM4_90_b1_sep16_scaffold_8119
Species: RBG_16_Deltaproteobacteria_48_10_curated (80%)
5 3386 bp 48.14 16.61 88.69
PLM4_90_b1_sep16_scaffold_6240
Species: RBG_16_Deltaproteobacteria_47_11_curated (83.33%)
6 3863 bp 48.25 11.45 88.69
PLM4_90_b1_sep16_scaffold_4978
Class: Deltaproteobacteria (80%)
5 4300 bp 50.47 14.23 88.67
PLM4_90_b1_sep16_scaffold_6762
Class: Deltaproteobacteria (60%)
5 4431 bp 45.79 20.62 88.63
PLM4_90_b1_sep16_scaffold_5293
Species: RBG_16_Deltaproteobacteria_47_11_curated (55.56%)
9 7581 bp 49.03 15.79 88.60
PLM4_90_b1_sep16_scaffold_9131
Species: RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated (66.67%)
3 3190 bp 50.50 17.02 88.59
PLM4_90_b1_sep16_scaffold_2113
Species: RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated (66.67%)
9 11589 bp 49.53 15.20 88.58
PLM4_90_b1_sep16_scaffold_4598
Species: RBG_19FT_COMBO_Chloroflexi_48_23_curated (50%)
6 6788 bp 50.88 12.77 88.57
Displaying items 251-300 of 889 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.