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PLM4_90_b1_sep16_scaffold_281

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_281_1
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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2..976
-----------------
DNA (975bp)
protein (325aa)
2-oxoacid:ferredoxin oxidoreductase, alpha subunit (EC:1.2.7.3)
2-oxoacid:ferredoxin oxidoreductase, alpha subunit Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4BZM4_DESTA
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_281_2
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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977..1822
-----------------
DNA (846bp)
protein (282aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase, beta subunit Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01R18_SOLUE
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_281_3
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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1824..2366
-----------------
DNA (543bp)
protein (181aa)
Pyruvate/ketoisovalerate oxidoreductase, gamma subunit Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RHP2_METVM
2-oxoglutarate ferredoxin oxidoreductase subunit gamma
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_281_4
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(2370..2978)
-----------------
DNA (609bp)
protein (203aa)
30S ribosomal protein S3Ae Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LM28_THEBM
30S ribosomal protein S3Ae
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_281_5
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(3029..4318)
-----------------
DNA (1290bp)
protein (430aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase Tax=Uncultured methanogenic archaeon RC-I RepID=SYS_UNCMA
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_281_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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4903..5460
-----------------
DNA (558bp)
protein (186aa)
hypothetical protein Tax=Sulfolobales archaeon Acd1 RepID=UPI0003714E8F
MarR family transcriptional regulator
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_281_7

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5851..6189
-----------------
DNA (339bp)
protein (113aa)
Marine sediment metagenome DNA, contig: S01H4_S05516 {ECO:0000313|EMBL:GAH05056.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_90_b1_sep16_scaffold_281_8
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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6399..6815
-----------------
DNA (417bp)
protein (139aa)
Putative uncharacterized protein Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DPM2_STAMF
hypothetical protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_281_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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6901..7326
-----------------
DNA (426bp)
protein (142aa)
Uncharacterized protein Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EDV7_PYRF1
hypothetical protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_281_10
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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7349..8173
-----------------
DNA (825bp)
protein (275aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_281_11
unknown

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8190..8588
-----------------
DNA (399bp)
protein (133aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_281_12
unknown

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comp(9013..9267)
-----------------
DNA (255bp)
protein (85aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_281_13

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9451..10293
-----------------
DNA (843bp)
protein (281aa)
inositol-1-monophosphatase (EC:3.1.3.25)
Putative inositol monophosphatase family protein Tax=uncultured marine microorganism HF4000_ANIW141A21 RepID=B3T5A2_9ZZZZ
Putative inositol monophosphatase family protein {ECO:0000313|EMBL:ABZ07761.1}; species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_ANIW141A21.;"
PLM4_90_b1_sep16_scaffold_281_14
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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10287..11132
-----------------
DNA (846bp)
protein (282aa)
Putative phosphoesterase Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YZ62_METPS
putative phosphoesterase
Tax=RBG_16_Bathyarchaeota_48_13_curated
PLM4_90_b1_sep16_scaffold_281_15
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11193..11792
-----------------
DNA (600bp)
protein (200aa)
Small heat shock protein HSP20 Tax=Archaea RepID=E6N969_9ARCH
hsp20-4; heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:AIC16665.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM4_90_b1_sep16_scaffold_281_16
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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11839..12249
-----------------
DNA (411bp)
protein (137aa)
Hypothetical conserved protein Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N2Y3_9ARCH
hypothetical protein
Tax=RBG_16_Bathyarchaeota_48_13_curated
PLM4_90_b1_sep16_scaffold_281_17
unknown

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12290..12406
-----------------
DNA (117bp)
protein (39aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_281_18
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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12622..13602
-----------------
DNA (981bp)
protein (327aa)
Replication factor-A domain-containing protein Tax=Methanobacterium formicicum DSM 3637 RepID=K2RVQ2_METFO
Replication factor-A domain-containing protein
Tax=RBG_16_Bathyarchaeota_48_13_curated
Displaying 18 items

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