ggKbase home page

PLM4_90_b1_sep16_scaffold_9140_3

Organism: PLM4_90_b1_sep16_Bathyarchaeota_47_9

near complete RP 35 / 55 MC: 6 BSCG 19 / 51 MC: 2 ASCG 33 / 38 MC: 4
Location: comp(1914..2537)

Top 3 Functional Annotations

Value Algorithm Source
Polar amino acid ABC transporter, inner membrane subunit Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5ECB4_AMICL similarity UNIREF
DB: UNIREF100
  • Identity: 42.0
  • Coverage: 193.0
  • Bit_score: 146
  • Evalue 3.00e-32
Marine sediment metagenome DNA, contig: S01H4_L02990 {ECO:0000313|EMBL:GAG57451.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.6
  • Coverage: 192.0
  • Bit_score: 148
  • Evalue 6.40e-33
polar amino acid ABC transporter inner membrane subunit similarity KEGG
DB: KEGG
  • Identity: 42.0
  • Coverage: 193.0
  • Bit_score: 146
  • Evalue 8.40e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 624
ATGCTGGAGGGCGTATCCACAACTCTGGCCATATCCATTTTTTCTCTCTTTCTAGGCCTAGGCGTCGGTCTTCCACTGTCTTTCGTCAGAGCCTACGCAAAAGGTTACGGGTTTTTTGTTGAAATGTTTGAGAAGGTTTTCAGAGGAATCCCCGAAATAGTTCTGATGCTGATTTTCTATTGGGGAGTAGGACTCTATTTTCCGTTTCCATTCAAAAGCGCATTCTTCACAGTCATTTTTGTCCTGGGCCTGAGAAGTGCGGCTAACCAGTCTCAAATATTCCGAGGAGCGATAAGGGGCATAGGCGAAGAGCAGATGGTGGCAGCGAGATCTCTTGGATTCTCAAAGTTGAGATCAGCGGTGCATATCATGATTCCGCAAGTTTTCATTTTTGCCACTCCAGGACTGGGAAGCGAATACGCTCTTCTGATAAAAGATTCGTCTTATGCCTTCATAATCGGCGTTCTCGACATAATGTACACGACAAACGTGATCAGAAAGGCAACTTCAGACGCGGTGACGCCGTATCTCGTGGCTGCCTTTCTATACATCCTCCTGACTTTCCCGATAGCAACGTGGTTGGACACTTGGGGAAGTAGAAGAAAGAAGAAACTGGGGTTCTAG
PROTEIN sequence
Length: 208
MLEGVSTTLAISIFSLFLGLGVGLPLSFVRAYAKGYGFFVEMFEKVFRGIPEIVLMLIFYWGVGLYFPFPFKSAFFTVIFVLGLRSAANQSQIFRGAIRGIGEEQMVAARSLGFSKLRSAVHIMIPQVFIFATPGLGSEYALLIKDSSYAFIIGVLDIMYTTNVIRKATSDAVTPYLVAAFLYILLTFPIATWLDTWGSRRKKKLGF*