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PLM4_90_b2_sep16_scaffold_1363_16

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_54_9

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 10576..11994

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 487.0
  • Bit_score: 477
  • Evalue 1.30e-131
rpoN; RNA polymerase sigma-54 factor RpoN similarity KEGG
DB: KEGG
  • Identity: 49.9
  • Coverage: 489.0
  • Bit_score: 469
  • Evalue 9.90e-130
Tax=RBG_16_Deltaproteobacteria_54_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 472.0
  • Bit_score: 792
  • Evalue 1.90e-226

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Taxonomy

RBG_16_Deltaproteobacteria_54_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1419
GTGGCCTTGGAACTCAAACATGATCTCAGGTTGACCCAGCAGCTGGTCATGACGCCCCAGCTGCAGCAGGCCATCAAGCTGCTGCAACTCTCGCGGATGGAGCTCCAGGAGGTCATCGACCAGGAGATTAAGGAAAATCCGCTTTTGGAGGAAGACAGCGGTCAGGAGGAGCCAGAACAAGAGGAGACAAAACAAGAGGAGGTCGCCGCTGAGGCTGAGGCACGCGAAGAGACCCGCGAATCCATCAAGGATCAAGACTGGGAAGAATATATGGAGGGCTACAGCATCAGCTCCTATACCTCGCCGAGGTCCGAAGGAGGCGATACGCCGTGGGAAAACCTGATCACCCGCCAGGTGACGCTCGCCGATTATCTGCTCTGGCAACTCGGGATGGGCCCCGTGTCCCCTCAACAGCGAGAGATCGGGGGCTTTATCATCGGCAATATCGACGAGAATGGTTATCTCCAGATTGCCCTTGAGGAGGTCTGTAAGGAGATGAGCTGCCCGGCGGAGGCGGCAGGGGGGGTACTCACCCTTATCCAGTCCTTTGATCCCCCTGGGGTCGGGGCACGTGACCTGCAAGAATGCCTCCTCATCCAGTTGCAAGGTCTTGCCGAGAGAAACCCGTTGGCAGAAGAGATAGTACAAGGCAGCCTCTCCTACTGCAAAAACAGGAACTACCGTGAATTGGCCAGGAAACTAAAGGTCCCCCTTGATCAGGTCTTAGAGGCCGTCGAGGTCATCTCGCATCTCGATCCCAAGCCTGGCCGCCCCTTCAGCCCCGAAGAGGCGAGAACCATTATCCCCGATGTCTTCGTCTATAAAGTTGAAGGGGAGTATGTGGTCGCCTTAAACGATGATGGGCTGCCCAAGCTGCGTATCAGTCCTTACTATCGTGAGCTCATCAACGCCAACAAAAAAGAGGTCCCCCGCCATTATCTCAAAGAAAAGATCAAATCCGCGCTCTGGCTCATCAGAAGCATACAGCAGCGGCAGATGACCCTCTACAAGACGACCAAGAGCATTGTCGCGTTCCAGAGGGATTTTTTCGACAAGGGGATCGATCATCTCAAACCCCTTGTCTTGAGAGAGGTGGCTGACGATATCCAGATGCACGAATCCACCGTGAGCCGGGTGACCACGAATAAGTATGCCCATACGCCACAGGGAATTTATGAGTTGAAGTTTTTCTTCAGCGGCAAGGTAGGGGGGCATGGCGAAGAGGTGGCTGTGAAGCGGGTACAAAACCTGATAAAACAGGTCATCACGGAAGAAAACCCCCGGAGGCCCTATAGCGATGAGAAGATATGCCAACTGCTCAAGGAGAGGCATACTATCGCCATAGCCCGCCGCACCGTGGCCAAGTATCGGGAGATGATGCGGATCCTCTCTTCCAGCGAAAGAAAAAAGGTCATGTAA
PROTEIN sequence
Length: 473
VALELKHDLRLTQQLVMTPQLQQAIKLLQLSRMELQEVIDQEIKENPLLEEDSGQEEPEQEETKQEEVAAEAEAREETRESIKDQDWEEYMEGYSISSYTSPRSEGGDTPWENLITRQVTLADYLLWQLGMGPVSPQQREIGGFIIGNIDENGYLQIALEEVCKEMSCPAEAAGGVLTLIQSFDPPGVGARDLQECLLIQLQGLAERNPLAEEIVQGSLSYCKNRNYRELARKLKVPLDQVLEAVEVISHLDPKPGRPFSPEEARTIIPDVFVYKVEGEYVVALNDDGLPKLRISPYYRELINANKKEVPRHYLKEKIKSALWLIRSIQQRQMTLYKTTKSIVAFQRDFFDKGIDHLKPLVLREVADDIQMHESTVSRVTTNKYAHTPQGIYELKFFFSGKVGGHGEEVAVKRVQNLIKQVITEENPRRPYSDEKICQLLKERHTIAIARRTVAKYREMMRILSSSERKKVM*