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PLM4_90_b2_sep16_scaffold_851_13

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_46_9

near complete RP 40 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(12678..13637)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 318.0
  • Bit_score: 372
  • Evalue 3.00e-100
RNA polymerase sigma54 factor similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 318.0
  • Bit_score: 365
  • Evalue 1.00e-98
Tax=RBG_16_Deltaproteobacteria_47_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 319.0
  • Bit_score: 579
  • Evalue 1.70e-162

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Taxonomy

RBG_16_Deltaproteobacteria_47_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
AAGATCTCCCTGGAGGATATCTGTTCAGAAACAAACCTTCCGATGGAGGTTGTAGAAGGAGTCCTTCGAAAAATTCAACAATTTGATCCCATTGGAGTGGCGGCGCGAGATTTGAAAGAATGTCTCCTCATCCAATTAACACAGATGGCCCCTCGAGATACCTTGGCAGAAAAAATTGTTTCCGAACATCTCTCTCTATTGAAAAATCGAAATTATCCGGTGATTGCTAAACGATTAGGTGTGTCTCTGGATCGAGTGAATCGAGCGGCTTCCCTCATTTCCAAATTGGACCCCAAACCCGGAAAGGCATTTGGAGGAGAGGTGATCCAAGAGATCATCCCTGACGTTTATGTTTATAAGGTCGAGGGGGATTATGTCATCTATCTGAACGATGAAGGAATCCCAAGGTTAAAGGTCAATTCCCTTTATCGAAATATCATCAATGGCGGTCGCCTTTCCCTCGAAGGGGACCGAAAATATATTCAGGAGAAACTCCGATCCGCCCTCTGGCTGATCCGCAGCATTCACCAACGCCAAAGGACGATTTACAAAGTGGCGAAAAGCATCGTGAAATTTCAAAGGGAATTTTTGGATAAAGGGATCCAGTTCCTCAGACCCCTTGTCCTGCGAGATGTGGCAGAAGATATCCAGATGCATGAATCTACCATTAGCCGGGTCACCCATAACAAATATGTCCATACCCCCCAGGGAATTTATGAATTAAAATTTTTCTTCAATGCGGGGATTACCTCCACCCAGGGGGAGACATTGGCTTCGGAAAGTGTCAAGAGTCTTGTTCGGGAGATCATCGCAAAAGAAGATCTGAGGAAACCTTATAGCGATGAGAAATTGGTCAAGATCCTCCAGGGGATGAATATCCATATTGCCCGGAGAACGGTTTCGAAATATAGAGAGATGATGAAGATCCTCTCCTCCAATGAACGGAGGAAGATCGTTTAA
PROTEIN sequence
Length: 320
KISLEDICSETNLPMEVVEGVLRKIQQFDPIGVAARDLKECLLIQLTQMAPRDTLAEKIVSEHLSLLKNRNYPVIAKRLGVSLDRVNRAASLISKLDPKPGKAFGGEVIQEIIPDVYVYKVEGDYVIYLNDEGIPRLKVNSLYRNIINGGRLSLEGDRKYIQEKLRSALWLIRSIHQRQRTIYKVAKSIVKFQREFLDKGIQFLRPLVLRDVAEDIQMHESTISRVTHNKYVHTPQGIYELKFFFNAGITSTQGETLASESVKSLVREIIAKEDLRKPYSDEKLVKILQGMNIHIARRTVSKYREMMKILSSNERRKIV*