ggKbase home page

PLM4_90_b2_sep16_scaffold_4804_9

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_46_9

near complete RP 40 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 5621..6004

Top 3 Functional Annotations

Value Algorithm Source
msbA; lipid A export ATP-binding/permease protein MsbA (EC:3.6.3.-) similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 106.0
  • Bit_score: 68
  • Evalue 8.00e-10
Lipid A export ATP-binding/permease protein MsbA Tax=Candidatus Nitrospira defluvii RepID=D8PHJ5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 35.8
  • Coverage: 106.0
  • Bit_score: 68
  • Evalue 2.80e-09
Tax=RBG_16_Deltaproteobacteria_49_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 106.0
  • Bit_score: 146
  • Evalue 2.60e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Deltaproteobacteria_49_23_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGTCTCTCTATCGCCGGCTCCTTGAATTTGTTAAACCTTATTGGTTCAAATTGGGCCTTGCCGTCATCTGTATGGTCTTTGTCTCTCTTCTGACCTCCGTGACAGCATACCTTGTAAAGCCTGTTTTCGACGGCGTCTTTTTCAAGAAAGAAGGAGTTTCAGCTTTTACGATTCCACCTTTCATAAACAATATCATCATACAACTTCATCTCGAAGATCTACTACTTAAGAAGGGTGTCGAGATGCTCCGCTTACTACCTGTTATTCTTATCCTCCTCTATTTACTAAAAGGCATCTTCAATTATGGCCAGGCTTACTCTCCCTCTCCTTCTTTACAAAGACACCCACCGGCATCATCATTTCCAGAATCACAAATGATGTAA
PROTEIN sequence
Length: 128
MSLYRRLLEFVKPYWFKLGLAVICMVFVSLLTSVTAYLVKPVFDGVFFKKEGVSAFTIPPFINNIIIQLHLEDLLLKKGVEMLRLLPVILILLYLLKGIFNYGQAYSPSPSLQRHPPASSFPESQMM*