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PLM4_90_coex_sep16_scaffold_1795_2

Organism: PLM4_90_coex_sep16_Deltaproteobacteria_55_11

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 515..850

Top 3 Functional Annotations

Value Algorithm Source
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SC_K08D17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 111.0
  • Bit_score: 196
  • Evalue 1.90e-47
PemK-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Nitrosococcus oceani genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 111.0
  • Bit_score: 188
  • Evalue 3.60e-45
MazF family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 111.0
  • Bit_score: 181
  • Evalue 7.40e-44

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Taxonomy

Smithella sp. SC_K08D17 → Smithella → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGGCCGGAATACTGAGAGGTGAGATTCGCTGGGCCGATTTGAATCCTGTGCGAGGCCATGAGCAGGCTGGTCTGCGCCCGGTTCTGGTTCTGAGTCACGATATCTTTAATGAACGTTCAGGAACCGTCATAGCCGTGGCGATTACCAGCCAGCCGCAAAAGGCCGGGTTTCCTTTGACCCTTGAACTAAAGACTCAACGCTTGCCTAAGCAGTCGTGGGTCAAGATTAGCCAAATCAGAACATTGTCCATCGAGAGGATCGGAAAACTGATTGGCAAAGCATCTCAGGAACAATTGGCCCAGGTGGTTGAAGGACTGAATGAAATCATTGCATAA
PROTEIN sequence
Length: 112
MAGILRGEIRWADLNPVRGHEQAGLRPVLVLSHDIFNERSGTVIAVAITSQPQKAGFPLTLELKTQRLPKQSWVKISQIRTLSIERIGKLIGKASQEQLAQVVEGLNEIIA*