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qh_1_scaffold_612_4

Organism: QH_1_Haloarcula_66_16

near complete RP 23 / 55 MC: 3 BSCG 18 / 51 MC: 2 ASCG 31 / 38 MC: 2
Location: 2903..4030

Top 3 Functional Annotations

Value Algorithm Source
Nonsense mediated mRNA decay protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KIS0_HALAR similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 377.0
  • Bit_score: 621
  • Evalue 7.50e-175
Nonsense mediated mRNA decay protein {ECO:0000313|EMBL:EMA21026.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula arg similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 377.0
  • Bit_score: 621
  • Evalue 1.00e-174
nmd3; nonsense mediated mRNA decay protein similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 379.0
  • Bit_score: 619
  • Evalue 6.10e-175

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Taxonomy

Haloarcula argentinensis → Haloarcula → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1128
ATGAGCCGGTCCGGAGCCTTCTGTCCGAAGTGTGGCGACGAGTTCGAGCCACCCGAGGACCGCCCCGCGCTCCCGGGCGCACAGCGGGACTCCGAACGAGTCCTCTGTGACGCCTGCTACTTCGAGGAGTTCGACCTGGTGGACGCCCCGGAGACCATCGAGGTCCGGGTGTGTGCCCAGTGTGGCGCGGTCCACAAGGGGAACCGCTGGGTCGACGTGGGCGCCGACGACTACACCGACATCGCCGTCGAACAGGTCAGCGAGGCGCTGGGCGTCCACGTCGGCGCCGAAAACGTCGAGTGGCAGGTCGCGCCCGAGCAACTCGACCGGAACAACATCCGGATGCACACGGAGTTCTCGGGCGTCGTCCGGGGCGTCCCGGTCCACGAGCAAGTGCGTGTCCCGGTGCGTATCGCCCGCGGGACGTGCAAGCGCTGCGGGAAGATAGCCGGCGGCTCCTTTGCCAGCGTCGTCCAGATACGCGCCGACGAGCGAGCGCCGACCGACGAGGAGGTCGAACGCGCCGAGACCATCGCCGAGGAGTACATCGCCGAGCGGGAGGCCACCGGCGACCGCAACGCCTTCATTACGGAGACTAACGAGGTCGACGACGGGCTGAACATGAAGATATCGACGACCCAGATGGGCCACGGCATCGCCAAGCGCATCACGGCCCAGCTCGGCGGGAGCTACGCCGACTCGAAGCGTCTCGTTACCGAGGACGAGGACGGCCAGAAGCTCTACCGGATGACCTACGCCGTCCGTCTGCCCCGCTACCGCCAGGGCGAACTCATCGACCCCGAGGACGGCGACGGCCCCGTTCTCGTGCGCTCGGTCCAGGGGAACCTCAAGGGCGTGCGACTCGCGACCGGCGAGGCCTACGAGGCCCGGTTCGAGGAGGGCGACGCGCCCGACGCCCGGCGGCTGGGGTTCCGGGAGGACGGCGAGCCGACGACGCTCGTCGCCGTCGAGGACGACAACGCCGTCCAGGTGCTGGACCCGGAGACCTTCGAGAGCGTGACCGTCCCGCGGCCCGACTACCTCGATACGGCCGCCGACGAGGTGCCGGTCGTCAAGAGCCGCGCCGGCCTGCACGTCCTGCCGACGGCCGAGCGCGACGATGAGTGA
PROTEIN sequence
Length: 376
MSRSGAFCPKCGDEFEPPEDRPALPGAQRDSERVLCDACYFEEFDLVDAPETIEVRVCAQCGAVHKGNRWVDVGADDYTDIAVEQVSEALGVHVGAENVEWQVAPEQLDRNNIRMHTEFSGVVRGVPVHEQVRVPVRIARGTCKRCGKIAGGSFASVVQIRADERAPTDEEVERAETIAEEYIAEREATGDRNAFITETNEVDDGLNMKISTTQMGHGIAKRITAQLGGSYADSKRLVTEDEDGQKLYRMTYAVRLPRYRQGELIDPEDGDGPVLVRSVQGNLKGVRLATGEAYEARFEEGDAPDARRLGFREDGEPTTLVAVEDDNAVQVLDPETFESVTVPRPDYLDTAADEVPVVKSRAGLHVLPTAERDDE*