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qh_1_scaffold_199_31

Organism: QH_1_Halobacteriales_66_30

partial RP 31 / 55 MC: 4 BSCG 27 / 51 MC: 3 ASCG 30 / 38 MC: 3
Location: comp(25805..29977)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit A'; EC=2.7.7.6;; Contains:; Mja rpoA1 intein; Mja rpol A' intein; TaxID=243232 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 999.99
  • Bit_score: 1059
  • Evalue 0.0
DNA-directed RNA polymerase subunit A' n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RPOA1_METJA similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 999.99
  • Bit_score: 1059
  • Evalue 0.0
DNA-directed RNA polymerase subunit A' similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 473.0
  • Bit_score: 837
  • Evalue 5.30e-240

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Taxonomy

Methanocaldococcus jannaschii → Methanocaldococcus → Methanococcales → Methanococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 4173
GACCCCGGGCTGGAGTGCAAGACCTGCGGCAAGCATTCGGGCTCCTGTAACGGCCATTTCGGCCACATCGAACTCGCAGCGCCGGTGATCCACGTCGGCTTCAACAAGCTGATCCGCCGGCTCCTGCGGGGCACCTGCCGGGAGTGTTCGCGGCTCTGCCTCACGGAAGACGAGAAGGCGGAGTTCGAAAGCCAGCTCCGCCGGACGCGTGACCTCGGCCGGGATCTCAGCGACGTGACGAAAGCGGCGATCAGGGCGGCTCGCAAGAAGGACCGCTGCCCGCACTGCGGCGAAAAGCAGTTCGACATCCAGCACGAGAAGCCGACGACCTACTACGAGGTCCAGCAGGTGCTCGCGTCGGACTACCCCGCGCGCATCGCGGCGGCGATGGAACCCGACGAGGACGGGGACCGTGTCACCCCGCCCGCACTCGCCGAGGAAACCGGCATCGACGCCGGCCGGATACAGGAGATTCTCTCGGGTGACTTCCGCCCGCGAAAGGAGGACCGCGAGGCCATCGAGTCGGCGCTCGGTGTCGACCTGACAGAGGAGGACATGAACAAGCTGATGCCCTCGGACATCCGGGACTGGTTCGAGGACATCCCGGCCGAGGACATCGCAGTCATCGGGATGGACCCCGAACGGTCGCGGCCCGAGTGGATGGTCCTCACGGTGTTGCCGGTACCCCCGGTAACCGCCCGGCCGTCGATCACGCTCGACAACGGCCAGCGCAGCGAGGACGACCTCACCCACAAGCTGGTGGACATCATCCGGATCAACCAGCGGTTCATGGAGAACCGCGAGGCCGGCGCGCCACAGCTGATCATCGAGGACCTCTGGGAGCTGCTGCAGTACCACGTGACGACGTTCATGGACAACGAGATAAGCGGGACGCCGCCTGCGCGCCACCGCTCGGGCCGGCCGCTGAAGACCCTCTCTCAGCGTCTCAAAGGCAAAGAAGGGCGGTTCCGCGGCTCGCTGTCCGGGAAGCGCGTCAACTTCTCGGCGCGGACTGTCATCTCGCCGGACCCGACACTCTCCCTGAACGAGGTGGGCGTCCCCAACCGGGTCGCGTCGGAGATGACACAGACGATGAACGTCAACAAGCGCAACCTGGAGAAGGCACGCCGGTACGTCAGGAACGGCCCCGAGGAGCACCCGGGCGCGAACTACGTCCGGCGCGAGGACGGCCGCCGGCTAAAGGTGACCGAGAAGAACTGCGAGGAACTCGCCGAGAAGGTCGAGCCGGGCTGGGAGGTCTCCCGGCACCTGATCGACGGCGACATCGTGATCTTCAACCGCCAGCCGTCGCTGCACCGGATGTCGATCATGGCCCACGAGGTGGTCGTGATGCCGTACAAGACGTTCCGGCTGAACACGACGGTGTGTGTCGCCGGCGATACCGAGGTCGACTGTGGCGGCTACGTCCGGCCGATCGAGGACGTTGAAGACGACTGGCGCGAAGAGTCCGTCACGACGTACGATCCTGACGACCGCGAGATTAGATCGACCGGGCTACAGGACTTCTGGTCGCTCCGTCCGGAGGAGTACGGTGCGACGGTCCACGAGATCGAGACCGAGTTCGGTTCGGTCGTCGCGACCTCGGATCACCCCTTCGAGACGCCCGACGGGCCGGTACCCGTCGAGGACCTGGAGGTCGGTGACACGCTGCTCCGGCGACCGATCGACCTTCCCGAGTTCGATCCGAATGCCGACGAACAGTTCGTTATCACCGAGGAGGACATCCGCGAGGCAGCACCCGAAGCGACGTACATCGGACACGCGATGCGAACGCTCGACGATCTCGTGTCCTTCGACGCGCACTCACGCGAGGGCGTCGCGGTTGCTCGTCTTGCCGGTCACCTGTTCGGTGACGGGACACTGGATCTGAGTGGGCAGACCGGGCGGTTGTTCTTCAGAGCAAGCCAGGACGATCTCGGTAGCATCCGGGAGGATCTCGAACTGCTCGGGTTCGAACCCGAAGATCCGGTGCTGAAGCACAATACTGCGGAACTCGTCGCAGCCGACGGCGGAACCACGACCGTGAGCGGGAGCGGCTGGTCGATGAAGATCGGAAGCAAACCGTTAGCGTCGTTCATGGCTGCTGTCGGCGTCCCGCCAGGTGACAAGGTCGAGTCGGATCACACCGTTCCAGACTGGATCCTGAATGGACCGAAAGCGGTCAAGCGGGCCTTTCTGAGTGCGTACTTCGGGGCAGAACTGAGTACGCCGTCATATCGTGGCCAGAAGTTGTTCAAGCAACCGGTATTCAAAGTTGCAAAAACTGAGCCATTGGTAGATGCCGGTAAACAGTTCATCGAGGAAATAGATGAGCTCTTGACGGAGTTCGGTACGGGAGTCTCGAACTTACGGGTCGTTGCGGGGAATCAGCGTGTCGATGGCGCCATCTCTCGCACGCTGGTGGCAGAACTCAAGGCGAGTCAGGAGGCTATCCGATCGCTGTTCGGAAAAATCGGGTACACTTACAACTCTGACGCTGACGCTGATGCGAGGATCGCTTATGCCTATATATCTGATAAGTATGGGTTCGAGAAGGATAGCCGGACAGTCCAAGACTTCTATGAATGGAAGAAAACACACGTTGAGAATGAAAAGGAAGGAGTGGTCAGAGATCCTATTAACTCGATTAGCGACGTTAAATCTCAACCAGTTTATGATGTCACTACGATAGACAGGTCTCACAAATTCGTAGTAAATTCGATAATATCAAATAATTGTCCTCCGTATAACGCCGACTTCGACGGCGACGAGATGAACATGCACGCCCTCCAGAACGAGGAGGCCCGGGCGGAGGCCCGCGTGCTGATGCGCGTCCAGGAGCAGATGCTGTCGCCGCGGTTCGGCGAGAACATCCTGGGGGCCATCCAGGACCACATCACCGGGACGTACCTCCTGACGAACACGAACCCCCGGTTCAACGAGACGCAGGCCCTGGACCTGCTGCGCGCCACCCGGATCGACGAACTGCCCGAACCCGACGGCGTCCGCACGAGCGGGGCGAGGGCGGGCTCGTCAGACGCCACAGCGACCGACGGCGAGGAGGACGGCACGGCCTACTGGACCGGCCGGACGATCTTCTCGGAGCTGTTGCCGGAGGGGCTGGACCTGGAGTTCACCTCCTCGACGGGCGACACGGTCGTCATCGAGGACGGCCAGTTGATCGAGGGGACGATCGACGAGGACGCGGTCGGCGCCTTCGAGGGCGACGTCGTCGACTCGATCGCCAAGCAGTACTCCCGGACGCGCGGCCGGATCTTCATCAACGAAGTGTCCTCGCTGGCCGTCCGGACGATGATGCACTTCGGGTTCTCGATCAGCATCGACGACGAGTCGATCCCGCCGGAGGCCCAGGCGCAGGTCGACGAGGCCATCGAGGAGGCCAACGAGCGCGTCGAGGAGCTGATCGACGCCTACGAGGCGGGCGACCTGGAGTCGCTGCCGGGCCGGACGATCGACGAGACGCTGGAGATGAAGATCATGCAGACGCTCGGCCAGGCGCGCGACAGCGCCGGCGACATCGCCGAGGACCACTTCGCCGACGACAACCCCGCCGTCATCATGGCCGAGTCCGGCGCGCGTGGCTCGATGCTGAACCTCACCCAGATGGCCGGCTGTGTCGGCCAGCAGGCGGTCAGGGGCGAGCGGATCAACCGCGGCTACGAGAACCGAACGCTATCCCATTACGCGGAGGGGGACCTCTCCTCGGACGCCCACGGCTTCGTGAAACACTCCTACCGCGAGGGGCTCGAACCCAAGGAGTTCTTCTTCCACGCGATGGGCGGCCGCGAGGGGCTGGTCGACACCGCCGTCCGGACCTCCAAGTCCGGCTACCTCCAGCGCCGGCTGATCAACGCCCTCTCCGAACTCGAAACCCAGTACGACGGCACCGTCCGGGATACCTCCGACACCATCGTCCAGTTCGAGTTCGGCGAGGACGGCACCTCGCCGGTCGAGGTCTCCAGCGGGCAGGAGGGGCCGACGGTCGACGTCGAGGATATCGCCGACCGCATCCTCGACGAGGAGTTCGAGAGTCCGGCCGAGAAGGAGCGGTTCATGGGCGACCAGCCCGACCCGACGAACCTCTCGGAACACACCGACGAGACGTGGCTCGAAAAGGCGGACGCGACGAGCGACGCCAGGAGTGATGACTGA
PROTEIN sequence
Length: 1391
DPGLECKTCGKHSGSCNGHFGHIELAAPVIHVGFNKLIRRLLRGTCRECSRLCLTEDEKAEFESQLRRTRDLGRDLSDVTKAAIRAARKKDRCPHCGEKQFDIQHEKPTTYYEVQQVLASDYPARIAAAMEPDEDGDRVTPPALAEETGIDAGRIQEILSGDFRPRKEDREAIESALGVDLTEEDMNKLMPSDIRDWFEDIPAEDIAVIGMDPERSRPEWMVLTVLPVPPVTARPSITLDNGQRSEDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFMDNEISGTPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPNRVASEMTQTMNVNKRNLEKARRYVRNGPEEHPGANYVRREDGRRLKVTEKNCEELAEKVEPGWEVSRHLIDGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTTVCVAGDTEVDCGGYVRPIEDVEDDWREESVTTYDPDDREIRSTGLQDFWSLRPEEYGATVHEIETEFGSVVATSDHPFETPDGPVPVEDLEVGDTLLRRPIDLPEFDPNADEQFVITEEDIREAAPEATYIGHAMRTLDDLVSFDAHSREGVAVARLAGHLFGDGTLDLSGQTGRLFFRASQDDLGSIREDLELLGFEPEDPVLKHNTAELVAADGGTTTVSGSGWSMKIGSKPLASFMAAVGVPPGDKVESDHTVPDWILNGPKAVKRAFLSAYFGAELSTPSYRGQKLFKQPVFKVAKTEPLVDAGKQFIEEIDELLTEFGTGVSNLRVVAGNQRVDGAISRTLVAELKASQEAIRSLFGKIGYTYNSDADADARIAYAYISDKYGFEKDSRTVQDFYEWKKTHVENEKEGVVRDPINSISDVKSQPVYDVTTIDRSHKFVVNSIISNNCPPYNADFDGDEMNMHALQNEEARAEARVLMRVQEQMLSPRFGENILGAIQDHITGTYLLTNTNPRFNETQALDLLRATRIDELPEPDGVRTSGARAGSSDATATDGEEDGTAYWTGRTIFSELLPEGLDLEFTSSTGDTVVIEDGQLIEGTIDEDAVGAFEGDVVDSIAKQYSRTRGRIFINEVSSLAVRTMMHFGFSISIDDESIPPEAQAQVDEAIEEANERVEELIDAYEAGDLESLPGRTIDETLEMKIMQTLGQARDSAGDIAEDHFADDNPAVIMAESGARGSMLNLTQMAGCVGQQAVRGERINRGYENRTLSHYAEGDLSSDAHGFVKHSYREGLEPKEFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELETQYDGTVRDTSDTIVQFEFGEDGTSPVEVSSGQEGPTVDVEDIADRILDEEFESPAEKERFMGDQPDPTNLSEHTDETWLEKADATSDARSDD*