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qh_1_scaffold_1283_10

Organism: QH_1_Halosimplex_carlsbadense_67_29

near complete RP 30 / 55 MC: 3 BSCG 28 / 51 MC: 2 ASCG 35 / 38 MC: 5
Location: comp(8897..9655)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1604022 species="Bacteria; Proteobacteria; Ga similarity UNIPROT
DB: UniProtKB
  • Identity: 36.3
  • Coverage: 124.0
  • Bit_score: 70
  • Evalue 4.60e-09
ribonuclease E n=1 Tax=Pseudomonas monteilii RepID=UPI00036D40EB similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 78.0
  • Bit_score: 72
  • Evalue 8.70e-10
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 28.2
  • Coverage: 220.0
  • Bit_score: 69
  • Evalue 1.60e-09

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Taxonomy

Pseudomonas sp. FeS53a → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
GTGAAGCAAGCGCCTCGAAGCGAACGGCATCGCCGTGAGCAAAGCGAGGCGCGAGTGGAGCGAGCGCCTCGAAGCGAACGACATTGCCGTGAGCAAAGCGAGGCGCGAGTGGAGCGAGCGCCTCGAAGCGAACGGCATCGCCGTGAGCAAAGCGAGGCGCGAGTGGAGCAAGCGCCTCGAAGCGAACAGTATTGCCGTGAGCAGAGCGAGCGCGGTTCACCACATCGCGGCCGACGACCGAGATACGGCCTGTTTCACCTGTGTTTTTGCCGGGTGGGTTCCCGCAGGGAGCGGAGCGACCTCGCGCCCGATGCCCGCGCTGGCGCCCGTCATGATGATCGTCTCCCGATGCCCGCGCTGGCGCCCGTCATGATGATCGTCTCGTCCGAGCAGTCACAGGCCGCAGTTGCCGTCCCTCTCCCCCAGAGCGGTTCTTTTTGTGGCTTTCCGCCCCAGCTTCCTCGGATTGCGGCCGCCGCGGCGACGAGCGCGACCAGCGCCGCCATGCCGACGGCGAACCGGCCCTCGACGGCACGCCGAGGTCGACTAACTCGCCGATCAGGTCATCGAGGTAGAGCGTCTCCAGCGGGACGCCGGAGCGTTCGGAGAGCTCCGAGCGGGTGTAGGTGTCGTCGTCCAACTCGACGAGCGTCGCGAGCAGTTCCGCGGCGCCGTCGCTGTGGGCTACGGATTATTGTAGATTATTTCCGGATTGTGCCGACCCCGGGGTCGGCGCGTACCGGTAAATCGCTACAATAA
PROTEIN sequence
Length: 253
VKQAPRSERHRREQSEARVERAPRSERHCREQSEARVERAPRSERHRREQSEARVEQAPRSEQYCREQSERGSPHRGRRPRYGLFHLCFCRVGSRRERSDLAPDARAGARHDDRLPMPALAPVMMIVSSEQSQAAVAVPLPQSGSFCGFPPQLPRIAAAAATSATSAAMPTANRPSTARRGRLTRRSGHRGRASPAGRRSVRRAPSGCRCRRPTRRASRAVPRRRRCGLRIIVDYFRIVPTPGSARTGKSLQ*