ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

qh_1_scaffold_1679_1

Organism: QH_1_Halosimplex_carlsbadense_67_29

near complete RP 30 / 55 MC: 3 BSCG 28 / 51 MC: 2 ASCG 35 / 38 MC: 5
Location: comp(3..1688)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein family 5 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QVI9_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 35.9
  • Coverage: 569.0
  • Bit_score: 391
  • Evalue 1.10e-105
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:EFW91252.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Hala similarity UNIPROT
DB: UniProtKB
  • Identity: 35.9
  • Coverage: 569.0
  • Bit_score: 391
  • Evalue 1.50e-105
dppA12; peptide ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 28.7
  • Coverage: 567.0
  • Bit_score: 222
  • Evalue 2.50e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Haladaptatus paucihalophilus → Haladaptatus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1686
ATGACAGGTGACGAGCTGTCAGAGCCGAATAGTAGTGTGTCCGACCGCCTGTCCCGACGACGGGTGCTACAGGCAGCGACGGCCCTCTCTGTCGGCCTCGCAGGGTGTGGTAACGGTGGTGACGGTGGAGGGACAGACAGTGACGGAACCGGGGGCGACCCGACCGAGACGACCGCGGCGGGCGTCGAGTTCACACCGACCCCGGACTCGACAGACGAGTCAACGGTTCAACAGGAGGGGCAACCGGTTACGACCGAGCTGGCGAGTCAGTTCGGCGCGTGGGACCCCGACAACACGAACTTCAACTTCTACTCTCCAGCGGGGAATCAGCCGCCGTTCTCGACGTACCTCTGGAACGAGGGGACGTTGTACCGCAACAACAGCGGACAGATCACGTATCACACGATCGACGATGTCGGCTTCGCAGACGACGGCAAGCAGGTAACGTTCAAATTCAAGGAGGGGTACACGTGGTGGGACGGAACGGACGTCACCGCCGAGGACTACCTGATACAGCGCCAGATAAATCAGTTCCAGCAGCACGGGTCGCTCGAGGCAGCGCCCGTCGAACTCGAGTTGGTCGATGACTACACTGTCCGCGAGAACCGGTCGACGGCCATCAACCCGACAGTTCGCCTGCTCAACCACGTCCAGGCGCTGTACACGAAGCGCGACGTCTACCGAGAGTGGCTCGAGAAGTACAAGGACGCGAGCGATGAGGAAGCGGTCAACAGTGTCACAGACGAACTGTCGCGGTATCAGATCTCGATGGACGAGTTCGCGGACGACGGGCTCGGCTGCGGGATGTGGCGGCCGGTCGAGTGGAACCCCCAGCGGGTGACGTACGAGAAGCACACGGGACACCCGCGGTCGGAGTGGACGGAACTCGAAACGTGGACCTGGGAGCTCGTCGATGGCGACCAGAAGGCCGACCAGGCCTTCCAGAACGACCGCTTCGACATGGGTGAGATCTCGTTCAAAAATGTGAATAAGTCTGATACGTATGAGAGCATCGGCCGGTTCGGCCTCCCGGGCGTTCCGAAGCTGACGATCAACTTCAGCAACAAGCACCTCGGACGCCGCGAAGTACGGCGGGCTATCGCCTATCTATTGGATCACGACGAACTCAGGGATGTCCTGCAGGCGAACTACGGGGCGCCGTACAAGCGCCATCCATATGTCAACGGAATGACCGCAGCGGTCGGCCGGAACCAGCTCGGGACGGATCATCTCGAGAAGCTCCTCGACTACGGGAGTTCGGCGGAGGTGGAAAAAGCCACTGCGGCGATGAAAGACGCTGGCTACTCGAAACAGGGCGATGTCTGGGTCGGCCCCGACGGTGACTCGGTCCAGGGGATCAAGTACATGTCGCCGCCGTGGGACATCTACCAGAGCATTCAGCAGTACTTCGCGTCGAAACTCACCGACTTCGGCATCGCCACAGAAGTCGTCCAGCCGTCCCGGGCGAACTTTTACAGCCGCCTCAACGACTCCTACGACTTCGACCTCCTCAACTGGTACCACTTCGGATTCCACCCGGTCAACAACTATTATATCGGCGCTGGAACGCCGACGGGACTGGACACTATGGAGACGGCGGTCGAGGGCGACGTCACTGCCGACAGTCCGCCGGAGCTGAACGCCGAACGGACACAGCGACTCAACCAGCCGATCCGGCCGACGTTC
PROTEIN sequence
Length: 562
MTGDELSEPNSSVSDRLSRRRVLQAATALSVGLAGCGNGGDGGGTDSDGTGGDPTETTAAGVEFTPTPDSTDESTVQQEGQPVTTELASQFGAWDPDNTNFNFYSPAGNQPPFSTYLWNEGTLYRNNSGQITYHTIDDVGFADDGKQVTFKFKEGYTWWDGTDVTAEDYLIQRQINQFQQHGSLEAAPVELELVDDYTVRENRSTAINPTVRLLNHVQALYTKRDVYREWLEKYKDASDEEAVNSVTDELSRYQISMDEFADDGLGCGMWRPVEWNPQRVTYEKHTGHPRSEWTELETWTWELVDGDQKADQAFQNDRFDMGEISFKNVNKSDTYESIGRFGLPGVPKLTINFSNKHLGRREVRRAIAYLLDHDELRDVLQANYGAPYKRHPYVNGMTAAVGRNQLGTDHLEKLLDYGSSAEVEKATAAMKDAGYSKQGDVWVGPDGDSVQGIKYMSPPWDIYQSIQQYFASKLTDFGIATEVVQPSRANFYSRLNDSYDFDLLNWYHFGFHPVNNYYIGAGTPTGLDTMETAVEGDVTADSPPELNAERTQRLNQPIRPTF