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qh_1_scaffold_1685_11

Organism: QH_1_Halosimplex_carlsbadense_67_29

near complete RP 30 / 55 MC: 3 BSCG 28 / 51 MC: 2 ASCG 35 / 38 MC: 5
Location: comp(8421..8786)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGP1_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 121.0
  • Bit_score: 215
  • Evalue 3.10e-53
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 121.0
  • Bit_score: 215
  • Evalue 4.30e-53
tfbA5; transcription initiation factor TFB similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 113.0
  • Bit_score: 192
  • Evalue 6.00e-47

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 366
ATGACCGCCGTGTCTCGCGTCGAGAAGATGGAACTCACTCGCACGTACCGCTACATCGTCCGCGAACTGAACCTGGAGATCAAGCCGGCCGACCCCGAGAGCTACCTCCCGCGGTTCGTTTCTGACCTGGGACTCTCTGACGACACCGAACGTCGCGCCCGCGAACTCGTCGAGAGTGCGCGCGACGACGGCATCCTCAGCGGCAAGAGTCCGGTCGGCCTCGCCGCCGCCGCCGTCTACGCCGCCGCGCTGCTGACCAACGAGAAGGTCACCCAGAGCGAGGTCAGCGGCGTCGCCAACATCTCAGAGGTCACCATCCGCAACCGTTACAAGGAGCTTCTCGAGACCGTCGAAGCCCCGGTCTGA
PROTEIN sequence
Length: 122
MTAVSRVEKMELTRTYRYIVRELNLEIKPADPESYLPRFVSDLGLSDDTERRARELVESARDDGILSGKSPVGLAAAAVYAAALLTNEKVTQSEVSGVANISEVTIRNRYKELLETVEAPV*