ggKbase home page

qh_1_scaffold_237_3

Organism: QH_1_Halosimplex_carlsbadense_67_29

near complete RP 30 / 55 MC: 3 BSCG 28 / 51 MC: 2 ASCG 35 / 38 MC: 5
Location: comp(2346..2888)

Top 3 Functional Annotations

Value Algorithm Source
CopG family ribbon-helix-helix transcription regulator n=1 Tax=Halobacterium sp. DL1 RepID=G4II79_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 179.0
  • Bit_score: 318
  • Evalue 5.00e-84
CopG family transcripitonal regulator {ECO:0000313|EMBL:AHG03073.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 179.0
  • Bit_score: 318
  • Evalue 7.00e-84
DNA-binding CopG-like domain-containing protein domain similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 181.0
  • Bit_score: 250
  • Evalue 2.70e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halobacterium sp. DL1 → Halobacterium → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 543
ATGAGTACGGACCGGCTGACCATCTCGCTCGACGGCGAGGCCCGGGACGCTCTCGACGACGTCGCGGAGGTGACCGACCGCTCACAGAGCGAGATCGTGCGGCGCGCGCTCACGTTCTACGCGGCGAACTACGAGGCGGCGAGCACGGATAGCTCGGAGACGCTCGCGGAGTACTACAAGATGCTGACCGGCGGTGAACACGTACTGCTCGACATCGACTTCCTCCACTGCTTCCTCGACCACGTGCAGGAGGACGGACAGCCGCGGCCGTCGTTCATCGAGGACGCCGACCGGGTCTCGGACTACCACGCGCAGGAGTATCAGGACCGCTTCGGCTCCCTCGACGAGCTACTGGAGTGGCTGTCGCTGTGCGGGTTCCTGACCGTGCGGCGGACCACGGAGAACACCTACCACATCGTGTTCCCGTCGGCGGACATCCGGTGGTTCATGACGCGGTTCATCGAGCGCAGCGTCGCCGGTCTCCCGTTCGACGTAGAGATCGAGGAAGGGGTCGCGAAGGTGTTACTCACCGAGCAGTCGTAG
PROTEIN sequence
Length: 181
MSTDRLTISLDGEARDALDDVAEVTDRSQSEIVRRALTFYAANYEAASTDSSETLAEYYKMLTGGEHVLLDIDFLHCFLDHVQEDGQPRPSFIEDADRVSDYHAQEYQDRFGSLDELLEWLSLCGFLTVRRTTENTYHIVFPSADIRWFMTRFIERSVAGLPFDVEIEEGVAKVLLTEQS*