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qh_1_scaffold_74_17

Organism: QH_1_Halosimplex_carlsbadense_67_29

near complete RP 30 / 55 MC: 3 BSCG 28 / 51 MC: 2 ASCG 35 / 38 MC: 5
Location: comp(12169..12786)

Top 3 Functional Annotations

Value Algorithm Source
DNA binding protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=L9V3L6_HALBP similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 190.0
  • Bit_score: 175
  • Evalue 7.70e-41
DNA binding protein {ECO:0000313|EMBL:ELY31795.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense (st similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 190.0
  • Bit_score: 175
  • Evalue 1.10e-40
DNA binding protein similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 125.0
  • Bit_score: 97
  • Evalue 4.40e-18

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Taxonomy

Halogeometricum borinquense → Halogeometricum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 618
ATGGTCGAGATCCGCAACGTCGGTCTCGAGACGATCGAATCTATCGTCGAGTGGCAGCGTGACCACCCTGTCGTGGCGAGAAGTGAACTGCAACAACACGCTGCCGACCAGCGCACGGCGCTCATCAGTCTCCAGACCGACTACTCGGGGACTGACACAGAACCTCTCATGAACGTTCTCAAGCGTCACGACTGCTTCCCGACCTCGGAGGCCGAGATCAAAAACGGACGCGAACACGGGTCGCTCCTGCTCGCTTCGACGGAGCAGATGCAGGCACTCTACGAGGACCTCACCGAATACGGCCCCGTGTCGGTCAAATCACTCACCGAGCTCGAGATCACTCATCCGCTGTCTGAACTAACAGAGGTCACACAGGTGATAAACGACCTCTCGAGCCGACAGCGAGAGATCCTGTCGCTGGCAATAGATGCGGGGTACTACGACTCTCCACGGCGATGCAGTGTCGACGACCTCGCCGAGATGGACGATACCGGAATGTCGACCGTCGCCGAACACCTCCGACTCGCCGAGATCAAGGTGCTGCAGGCTGTCCGCCCACTCCTCGAGAACCACGAGGGAGCGACTGTCGAGACTCCCGAACCCGCTGCCCCGAAGTGA
PROTEIN sequence
Length: 206
MVEIRNVGLETIESIVEWQRDHPVVARSELQQHAADQRTALISLQTDYSGTDTEPLMNVLKRHDCFPTSEAEIKNGREHGSLLLASTEQMQALYEDLTEYGPVSVKSLTELEITHPLSELTEVTQVINDLSSRQREILSLAIDAGYYDSPRRCSVDDLAEMDDTGMSTVAEHLRLAEIKVLQAVRPLLENHEGATVETPEPAAPK*