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qh_1_scaffold_1127_13

Organism: QH_1_Halobacteriales_64_38

near complete RP 33 / 55 MC: 4 BSCG 28 / 51 MC: 1 ASCG 37 / 38 MC: 1
Location: comp(9992..10855)

Top 3 Functional Annotations

Value Algorithm Source
tfbA; transcription initiation factor TFB similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 286.0
  • Bit_score: 399
  • Evalue 5.80e-109
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halof similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 286.0
  • Bit_score: 399
  • Evalue 2.90e-108
tfbA6; transcription initiation factor TFB; K03124 transcription initiation factor TFIIB id=24630171 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1 similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 286.0
  • Bit_score: 399
  • Evalue 3.50e-108

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Taxonomy

Haloquadratum walsbyi → Haloquadratum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 864
TTGGTACGTGACGCTCGACACGGCGAGACGGTCTGTAGCGACTGCGGACTCGTCGTCGCCGAGGGGGAGATCGATCGCGGGCCCGAGTGGCGCGGGTTCGACCACGGCGAGCGAGGACGGAAGTCCCGCGTCGGTGCGCCGATCACCGATCGACTCCACGACAAGGGCCTGTCTACCGCTATCGACTGGCAGGACAAGGACGCCTACGGTAACAGGTTGAGCGCGCGCAAGCGACAGCGAATGAGTCGTCTTCGGACATGGAACAAGCGCTTTCGCACACACGACGCCGGACAGCGCACCCTCAGACAGGCGCTCGGCGAGATCGACCGCATGGCGAGCGCGCTCGGCGTTCCCGAGACGATCCACGAGACCGCGAGCGTTATCTACCGTCGCGCGCTCGAAGCGGGTCTCCTGCCCGGCCGGTCGATCAAAGCGATCACGACCGCAGCACTCTACGCCGCCACCAAGGCGGCCGGTGCGCCGCGGACGATCGACGAGGTCGCCGCCGTCAGCCGCATCGATCGAACCGAGTTCACCCGCGCGTATCGCTACGTCGTCCGCGAACTCGGGCTCGAAATCGTCCCTGCCGGCTCCGCTCAGCATCTCCCGCGATACGTCTCGGAGCTCGACCTCTCGGGCGAGACCGAGCGCCGAGCCCGCGAATTACTGCGAGCGGGGAAGGAGTCGGGGATTCACAGTGGTCGGAACCCCGTCGGCCTCGCCGCCGCGGCGATCTATGCGGGCGCGACGCTCACGAACGAGACCCTGACTCAAGAGACCGTCCCGGACGCCACCGACATCAGTACGGTCACCATCCGAACGCGCTACAAGCAGCTCCTTGAAGCCGACGGTGCCGGCTTCTGA
PROTEIN sequence
Length: 288
LVRDARHGETVCSDCGLVVAEGEIDRGPEWRGFDHGERGRKSRVGAPITDRLHDKGLSTAIDWQDKDAYGNRLSARKRQRMSRLRTWNKRFRTHDAGQRTLRQALGEIDRMASALGVPETIHETASVIYRRALEAGLLPGRSIKAITTAALYAATKAAGAPRTIDEVAAVSRIDRTEFTRAYRYVVRELGLEIVPAGSAQHLPRYVSELDLSGETERRARELLRAGKESGIHSGRNPVGLAAAAIYAGATLTNETLTQETVPDATDISTVTIRTRYKQLLEADGAGF*