ggKbase home page

qh_1_scaffold_801_1

Organism: QH_1_Oscillatoriophycideae_48_107

near complete RP 49 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(353..1345)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YVJ3_DACSA similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 330.0
  • Bit_score: 552
  • Evalue 2.90e-154
RNA polymerase sigma factor, cyanobacterial RpoD-like family similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 330.0
  • Bit_score: 552
  • Evalue 8.10e-155
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 330.0
  • Bit_score: 552
  • Evalue 4.00e-154

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dactylococcopsis salina → Dactylococcopsis → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGCCCACTGCCAAAATCGACAACAATAACAACAACGAACAGCCGACTATATCGGCTGACATGGTACGTACTTATCTGCACGAGATTGGTCGGGTACCACTGCTAAACCACGAACAGGAAATCGTTTACGGCAAGCAAGTTCAGAAAATGATGGGCTTGCTAGAAGAACAAGAAAAACTGCAAAAAGAGCTACAGCGCGAACCTACCCACCAAGAGTGGGCAGAGCAGGTTCAGATGAGCCAGTCTGAACTAAAAGAGGCTTTGCGGCAGGGAAATCGAGCAAAGCGTAAAATGATCGAGGCGAACTTGCGTTTAGTGGTGGCGATCGCCAAAAAGTACCAGAAGCGCAACATGGAATTCCTCGACCTAATTCAAGAGGGAACATTGGGTCTGGAGCGAGGAGTAGAAAAATTTGACCCGACGCGGGGTTATAAATTCTCCACTTATGCCTACTGGTGGATTCGCCAAGCGATTACTCGGGCGATCGCCCAACAAGCCCGTGCGATTCGCCTGCCTATCCATATTACCGAAAAGCTCAACAAAATCAAGAAAGTACAACGAGAACTGGCTCAGAAACTGGGTCGAAACGCCACCCCGAGCGAAATTGCCGAGGAGCTAGACCTAGAACCCTCTCAAATCCGAGAATACCTGAGCATTGCTCGTCAACCGATTTCTCTTGATGTTCGCGTTGGGGATAACCAGGATACGGAACTAGCCGATCTCCTAGAAGACGATGAGAGTTCTCCAGATACTTACATCACCGAGGAGTCGATGCGACAAGACTTAGACGGCATCCTCTCAGAACTCACCTCCCAACAGCGAGAAGTGCTATCCCTGCGCTTCGGGCTGGAGGATGGCAATGAAATGTCCTTAGCCAAAGTCGGTAAGAAACTCAACCTTAGCCGCGAGCGCGTCCGTCAGCTAGAGCACCAAGCTCTCGCCCAACTCCGCAAACTCCGCTCCAATGTCCAAGAGTACATCGCTGCTAGCTAA
PROTEIN sequence
Length: 331
MPTAKIDNNNNNEQPTISADMVRTYLHEIGRVPLLNHEQEIVYGKQVQKMMGLLEEQEKLQKELQREPTHQEWAEQVQMSQSELKEALRQGNRAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGTLGLERGVEKFDPTRGYKFSTYAYWWIRQAITRAIAQQARAIRLPIHITEKLNKIKKVQRELAQKLGRNATPSEIAEELDLEPSQIREYLSIARQPISLDVRVGDNQDTELADLLEDDESSPDTYITEESMRQDLDGILSELTSQQREVLSLRFGLEDGNEMSLAKVGKKLNLSRERVRQLEHQALAQLRKLRSNVQEYIAAS*