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QH_1_Halobacteriales_65_13

In projects: QH_1  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Displaying items 1-50 of 227 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_1_scaffold_2871
Species: Haloarcula vallismortis (50%)
2 3949 bp 64.35 14.76 81.13
qh_1_scaffold_3636
Species: Halogeometricum pallidum (50%)
2 3409 bp 64.74 13.79 70.49
qh_1_scaffold_4347
Species: Halogranum salarium (66.67%)
3 3065 bp 66.07 11.29 100.03
qh_1_scaffold_3675
Species: Halosimplex carlsbadense (66.67%)
3 3388 bp 69.04 14.11 80.14
qh_1_scaffold_12011
Order: Halobacteriales (66.67%)
3 3494 bp 64.54 13.31 83.03
qh_1_scaffold_7180
Order: Halobacteriales (66.67%)
3 3973 bp 71.38 14.30 84.19
qh_1_scaffold_4902
Order: Halobacteriales (66.67%)
3 3823 bp 62.96 15.07 81.45
qh_1_scaffold_15304
Class: Halobacteria (100%)
3 3085 bp 64.96 10.92 87.52
qh_1_scaffold_7480
Order: Halobacteriales (66.67%)
3 4094 bp 62.14 14.14 89.40
qh_1_scaffold_4107
Class: Halobacteria (66.67%)
3 3182 bp 65.43 13.04 80.80
qh_1_scaffold_3463
Class: Halobacteria (66.67%)
3 4169 bp 66.95 12.38 91.96
qh_1_scaffold_5187
Class: Halobacteria (66.67%)
3 3465 bp 61.53 10.62 77.58
qh_1_scaffold_3054
Order: Halobacteriales (66.67%)
3 3795 bp 65.59 15.94 70.28
qh_1_scaffold_3055
Class: Halobacteria (66.67%)
3 3794 bp 68.00 13.21 98.37
qh_1_scaffold_3079 3 3779 bp 60.23 14.77 57.08
qh_1_scaffold_7556
Order: Natrialbales (75%)
4 3982 bp 64.49 16.42 91.61
qh_1_scaffold_8955
Species: halophilic archaeon J07HX64 (50%)
4 3703 bp 64.89 12.94 80.85
qh_1_scaffold_5965
Order: Natrialbales (50%)
4 4080 bp 64.51 11.03 79.49
qh_1_scaffold_4187
Species: halophilic archaeon J07HX64 (50%)
4 3138 bp 67.14 12.36 87.76
qh_1_scaffold_4189
Order: Halobacteriales (100%)
4 5309 bp 67.34 14.05 74.65
qh_1_scaffold_8055
Genus: Haloarcula (75%)
4 3205 bp 67.36 12.54 86.77
qh_1_scaffold_2416
Order: Halobacteriales (100%)
4 4371 bp 66.78 18.83 78.04
qh_1_scaffold_3691
Order: Natrialbales (50%)
4 5635 bp 66.96 12.80 88.32
qh_1_scaffold_4842
Order: Halobacteriales (50%)
4 3904 bp 64.68 13.45 74.23
qh_1_scaffold_9476
Species: halophilic archaeon J07HX64 (75%)
4 3896 bp 63.32 11.91 75.62
qh_1_scaffold_3268
Order: Halobacteriales (50%)
4 3626 bp 68.31 12.93 96.47
qh_1_scaffold_5101
Species: halophilic archaeon J07HX64 (50%)
4 5373 bp 67.11 15.58 87.66
qh_1_scaffold_6719
Species: Halosimplex carlsbadense (50%)
4 3973 bp 66.27 11.96 81.40
qh_1_scaffold_5570
Order: Halobacteriales (75%)
4 4135 bp 63.63 10.69 68.34
qh_1_scaffold_3008
Order: Halobacteriales (75%)
4 4567 bp 63.98 14.58 98.73
qh_1_scaffold_15275
Class: Halobacteria (50%)
4 3277 bp 66.98 13.49 74.89
qh_1_scaffold_3286
Order: Halobacteriales (75%)
4 3614 bp 64.50 15.83 96.38
qh_1_scaffold_5831
Class: Halobacteria (75%)
4 3954 bp 64.77 12.62 79.89
qh_1_scaffold_3165
Order: Natrialbales (50%)
4 4468 bp 64.88 14.48 83.93
qh_1_scaffold_2037
Species: halophilic archaeon J07HX64 (100%)
4 4839 bp 68.59 12.19 96.47
qh_1_scaffold_2686
Species: halophilic archaeon J07HX64 (50%)
4 4099 bp 68.11 11.88 93.68
qh_1_scaffold_5640
Order: Natrialbales (50%)
4 3232 bp 68.13 11.45 87.53
qh_1_scaffold_10043
Order: Halobacteriales (50%)
4 3777 bp 67.06 12.68 82.45
qh_1_scaffold_4304
Order: Halobacteriales (50%)
4 3087 bp 68.38 13.28 94.36
qh_1_scaffold_9363
Species: halophilic archaeon J07HX64 (50%)
4 3203 bp 62.19 11.49 63.41
qh_1_scaffold_7751
Order: Halobacteriales (75%)
4 3500 bp 67.83 12.91 91.11
qh_1_scaffold_2386
Order: Halobacteriales (50%)
4 4413 bp 66.05 12.96 92.05
qh_1_scaffold_4330
Species: Halosimplex carlsbadense (50%)
4 5496 bp 64.21 13.43 74.89
qh_1_scaffold_4333
Order: Halobacteriales (75%)
4 3070 bp 64.40 10.94 75.05
qh_1_scaffold_2714
Order: Halobacteriales (60%)
5 4076 bp 61.53 11.24 72.35
qh_1_scaffold_8028
Order: Natrialbales (60%)
5 3696 bp 65.75 11.28 89.37
qh_1_scaffold_9872
Order: Halobacteriales (60%)
5 3441 bp 61.93 13.60 54.23
qh_1_scaffold_2839
Domain: Archaea (60%)
5 3973 bp 63.30 11.20 77.62
qh_1_scaffold_3230
Order: Halobacteriales (100%)
5 6841 bp 66.44 12.98 91.78
qh_1_scaffold_2618
Order: Halobacteriales (80%)
5 5346 bp 61.63 12.29 71.72
Displaying items 1-50 of 227 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.