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qh_1_scaffold_4778_3

Organism: QH_1_Halobacteriales_68_42

partial RP 20 / 55 MC: 3 BSCG 15 / 51 MC: 2 ASCG 30 / 38 MC: 4
Location: comp(1199..1555)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:ELZ25451.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ELZ25451.1};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 118.0
  • Bit_score: 201
  • Evalue 6.20e-49
DNA-directed RNA polymerase subunit F n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQD3_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 118.0
  • Bit_score: 201
  • Evalue 4.50e-49
RNA polymerase Rpb4 similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 118.0
  • Bit_score: 189
  • Evalue 4.90e-46

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 357
ATGACGATCTTCAAGCACAAGCTGGACGAGGAGTTCCTGACCGTCGCCGAGACCAAGGAGATCCTGGAGGAACTCGAACGCGAGCGCGCGGCCGACGAGGACCGCGAGATGCGCTACGAACTCGCGCGGGCGATCGAACACGTCAACCGCTTCGCCGTCCTCGACCCCGAGGAGTCCCGCGAGTTCGTCGCGGAACTACTCGAACTGGAGAAGGTCGACGAGGCGACCGCCTACAAGATCGCCGACCTCCAGCCCCGGGACCGGGACGAGTTGCGCGCCGTCTACGCACAGGAGCGTTACTCCCTGTCGGGCGACGAACTCGACGAGATCCTCGAAGTCGTCGCCAAGTACGCCTGA
PROTEIN sequence
Length: 119
MTIFKHKLDEEFLTVAETKEILEELERERAADEDREMRYELARAIEHVNRFAVLDPEESREFVAELLELEKVDEATAYKIADLQPRDRDELRAVYAQERYSLSGDELDEILEVVAKYA*