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qh_1_scaffold_5795_2

Organism: QH_1_Halobacteriales_68_42

partial RP 20 / 55 MC: 3 BSCG 15 / 51 MC: 2 ASCG 30 / 38 MC: 4
Location: comp(517..714)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor Spt4 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D171_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 65.0
  • Bit_score: 132
  • Evalue 1.80e-28
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 65.0
  • Bit_score: 132
  • Evalue 2.60e-28
DNA-directed RNA polymerase subunit E, RpoE2 similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 65.0
  • Bit_score: 119
  • Evalue 4.50e-25

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 198
ATGGCCGACAGGCTCGTCTGCCGGGAGTGCCACCGCGTCCAGGACTCCGAGGAGGCCGACACCTGCGTCGCCTGTGGCTCGTCGTCGCTCACGGAGGACTGGGCCGGCTACGTCGTCATCACCCACCCCGACCGCTCCGAAATCGCGGCGGAGATGGGCGTCACGGAACCCGGCCGGTACGCGCTCAAGGTCCGCTAA
PROTEIN sequence
Length: 66
MADRLVCRECHRVQDSEEADTCVACGSSSLTEDWAGYVVITHPDRSEIAAEMGVTEPGRYALKVR*