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qh_1_scaffold_1142_5

Organism: QH_1_Halococcus_66_18

near complete RP 32 / 55 MC: 10 BSCG 27 / 51 MC: 2 ASCG 37 / 38 MC: 4
Location: 2395..3864

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 489.0
  • Bit_score: 933
  • Evalue 1.20e-268
tRNA-splicing ligase RtcB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUD1_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 489.0
  • Bit_score: 933
  • Evalue 8.80e-269
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 490.0
  • Bit_score: 809
  • Evalue 4.20e-232

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1470
ATGGACACCTACGACGCCGACGGGATCACGCTCGAACGCGTAGCGGAGAACGTCTGGGAAATCCCACAGGAAGGCGGGATGAACGCGCCCGCACGGGTGCTTGCGAGCGAGGCGCTGCTCGACGAGATCGCCGACGACATGACGCTCGAACAGCTCAAGAACTCGACGAATCTCCCCGGTGTGGAGAAGTACGCGATCTGCATGCCCGACGGCCACCAGGGCTACGGCTTCCCGGTCGGCGGGGTCGCGGGCATCGACGCCGAGAACGGCTGTATATCGCCCGGAGCTGTCGGATTCGACATAAATTGTGGCGTCCGGATGATGACGACGAACCTCACCTACGGCGACGTCGAGGGCCACGAGGAGGAGCTGGTCGAGTCGCTGTTCGCGAACATCCCGTCCGGGCTCGGCGGCGGTGGCGTGGTCGAATCGGGCGTCGACACCGTCGAAGCCGTCCTCGAACTGGGGATGGACTGGGCGCTGGAGGAGGGCTACGCCGTCGCCGAGGACCTCGCCCACTGCGAGGACGAGGGCCGCCGGCCGGACGCCGATCCAGGCGTTGTCTCACAGAAGGCGAAGGACCGCGGGAAGAATCAGATCGGGAGCCTCGGCTCGGGCAACCACTTCCTTGAAGTCCAGCGCGTGACCGACGTCTTCCGGGCGGACGTGGCGGATGCGTACGGTCTCGCCGAGGAGCAGATCGTGGTGTTGATCCACTGCGGGAGCCGAGGGCTAGGCCACCAAGTCTGCACCGAGTACACCCGCGAGGTCGAGCAGGCTCATTCGGGACTGCTCGATCGACTCCCGGACAAGGAGCTCGCGGCCGCGCCCGCCGGGAGCCAACTCGCCGAGGAGTACTACGGCGCGATGTGTGCGGCGATCAACTACGCGTGGGTCAACCGCCAGCTCATCATGCACCGCACTCGTCAGGTGTTCGAGCGCGTCTTCGATCGGTCGTGGGAGGCAATGGAGATGGACCTGCTGTACGACGTCGCGCACAACATCGCGAAGAAGGAAGTCCACGACGTCGGGGGCGAGGACGGCGAGGAAGAACGCGAACTCTACGTCCATCGGAAGGGCGCGACGCGGGCGTTCCCCGCCGGCCGAGAGGAGGTTCCGAGTGCGTACCGCGACGTAGGCCAGCCCGTCATCATTCCGGGAAGCATGGGCGCAGGGAGCTACGTGCTTCGTGGCGGCGAGGCCTCGCTCGAAACCACGTTCGGCTCGACCGCCCACGGCGCGGGCCGGACGATGAGTCGGACCCAGGCCAAGAACGAGTTCTGGGGTGAGGACGTCCAGGACGACCTGCAGGAGCAGAAGGTGTACGTGAAGGCCCAGAGCGGCGCGACAGTGGCCGAGGAGGCGCCAGGCGTCTACAAGAACGTCGACGAGGTGGTGCGGGTCTCCGAGGAACTCGGGATCGGCGATACGGTCGCGCGGACGTTCCCGGTCTGCAACATCAAGGGGTGA
PROTEIN sequence
Length: 490
MDTYDADGITLERVAENVWEIPQEGGMNAPARVLASEALLDEIADDMTLEQLKNSTNLPGVEKYAICMPDGHQGYGFPVGGVAGIDAENGCISPGAVGFDINCGVRMMTTNLTYGDVEGHEEELVESLFANIPSGLGGGGVVESGVDTVEAVLELGMDWALEEGYAVAEDLAHCEDEGRRPDADPGVVSQKAKDRGKNQIGSLGSGNHFLEVQRVTDVFRADVADAYGLAEEQIVVLIHCGSRGLGHQVCTEYTREVEQAHSGLLDRLPDKELAAAPAGSQLAEEYYGAMCAAINYAWVNRQLIMHRTRQVFERVFDRSWEAMEMDLLYDVAHNIAKKEVHDVGGEDGEEERELYVHRKGATRAFPAGREEVPSAYRDVGQPVIIPGSMGAGSYVLRGGEASLETTFGSTAHGAGRTMSRTQAKNEFWGEDVQDDLQEQKVYVKAQSGATVAEEAPGVYKNVDEVVRVSEELGIGDTVARTFPVCNIKG*