ggKbase home page

qh_10_scaffold_124

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_124_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(217..1224)
-----------------
DNA (1008bp)
protein (336aa)
Threonine dehydratase biosynthetic {ECO:0000313|EMBL:CBH24380.1}; EC=4.3.1.19 {ECO:0000313|EMBL:CBH24380.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
Threonine dehydratase biosynthetic n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8M5_SALRM
ilvA; Threonine dehydratase biosynthetic
qh_10_scaffold_124_2
unknown

Not on your lists

comp(1548..2087)
-----------------
DNA (540bp)
protein (180aa)

This feature has no annotations

qh_10_scaffold_124_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2048..2743)
-----------------
DNA (696bp)
protein (232aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCV9_SALRM
smtA; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25864.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_10_scaffold_124_4
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2780..4444)
-----------------
DNA (1665bp)
protein (555aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B71491
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
cobalamin (vitamin B12) biosynthesis CbiX protein
qh_10_scaffold_124_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4720..5349)
-----------------
DNA (630bp)
protein (210aa)
hypothetical protein id=24658672 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN72962.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qh_10_scaffold_124_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5421..7541)
-----------------
DNA (2121bp)
protein (707aa)
outer membrane receptor for transport of vitamin B; K02014 iron complex outermembrane recepter protein id=24658671 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Outer membrane receptor for transport of vitamin B, putative {ECO:0000313|EMBL:ABC46306.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
outer membrane receptor for transport of vitamin B
qh_10_scaffold_124_7
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7693..9456)
-----------------
DNA (1764bp)
protein (588aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5F180
Uncharacterized protein {ECO:0000313|EMBL:EQB10671.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lac
iron-regulated membrane protein
qh_10_scaffold_124_8
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(9668..12073)
-----------------
DNA (2406bp)
protein (802aa)
ferrichrome-iron receptor n=1 Tax=Salisaeta longa RepID=UPI0003B57B2F
Uncharacterized protein {ECO:0000313|EMBL:KER09694.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium
TonB-dependent siderophore receptor
qh_10_scaffold_124_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12498..13235)
-----------------
DNA (738bp)
protein (246aa)
hypothetical protein
hypothetical protein id=24657313 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23460.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_10_scaffold_124_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13335..13787)
-----------------
DNA (453bp)
protein (151aa)
deoxycytidine triphosphate deaminase
deoxycytidine triphosphate deaminase id=24657311 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Deoxycytidine triphosphate deaminase {ECO:0000313|EMBL:ABC44891.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qh_10_scaffold_124_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14040..15017)
-----------------
DNA (978bp)
protein (326aa)
prs; ribose-phosphate pyrophosphokinase 1; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] id=24657309 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribose-phosphate pyrophosphokinase 1 {ECO:0000313|EMBL:CBH23456.1}; EC=2.7.6.1 {ECO:0000313|EMBL:CBH23456.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rh
prs; ribose-phosphate pyrophosphokinase 1
qh_10_scaffold_124_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15218..15826)
-----------------
DNA (609bp)
protein (203aa)
ruvA; Holliday junction DNA helicase ruvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] id=24657308 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
ruvA; Holliday junction DNA helicase RuvA
qh_10_scaffold_124_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15895..16356)
-----------------
DNA (462bp)
protein (154aa)
dksA; DnaK suppressor protein
dksA; DnaK suppressor protein id=24657307 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative RNA polymerase-binding protein DksA {ECO:0000313|EMBL:ABC45591.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sour
qh_10_scaffold_124_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(16635..18017)
-----------------
DNA (1383bp)
protein (461aa)
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=24657306 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
ileS; isoleucyl-tRNA synthetase
Displaying 14 items

View Taxonomy