ggKbase home page

qh_10_scaffold_970_18

Organism: QH_10_Halobacteriales_64_15

near complete RP 31 / 55 MC: 5 BSCG 27 / 51 MC: 3 ASCG 38 / 38 MC: 3
Location: comp(15730..16599)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAB5_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 283.0
  • Bit_score: 403
  • Evalue 1.40e-109
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 283.0
  • Bit_score: 403
  • Evalue 2.00e-109
transcription initiation factor iib (tfiib) similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 295.0
  • Bit_score: 380
  • Evalue 3.70e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 870
GTAATGAGTCAGGTGCAGTCGAAGGCCGCCTGTCCGGAGTGTAGCGGGCGACTCGAAGCGGGCGAGGAGACCTTCTGTTCCGACTGCGGGCTGGTCGTCGCCGAGGACTACCTCGATCGCGGCCCGGAGTGGCGATCGTTCAGCGACGATTCCGAGAACCGCGAGCGGACCGGCGCGCCGCTTACCCGGGCGCGTCACGATCGCGGCCTCTCGACGGAGATCGGCCGCTCACGGGATCTCAGCTCGAAGAAGCGCCGCCGGCTCGCCCGGATGCGTCGCCAGCACAACCGCGCACGTATCTCCTCGAAGGCCGATCGCAATCGAGTGTATGCCTTCACCGAGATCCGCCGGCTGGTGAGCAGTCTCGGACTCCCCCAGTCCATCCGCGATCAGGCCTGCGTGCTCTTCGAGTCGGCCCAGTCCGCCGATCTCCTGCGCGGGCGCTCGCTGGAGGGGTTCGCCGCCGCGTCGGTCTATGCCGTCTGTCGAACCGCCGCCGTCTCCCGAACGGTGGGTGAGATCGCCGACGTCGCACGTGCCTCCGAGGCCGAACTCAAGGCCGCCTACGACGCGCTCAATCGCGAACTCGGTCTCCCTACTGGGCCGATCGACCCGGCCGAATACATCGGGCGCTTCGCGAGCCAACTCGACGTCCCGAAGGCCGTCGAGGCACGCGCACGCGAGTTCGTGACCGAAGGGCGCGAGCGCGGACTGATCAACGGGCGCAACCCGAGCGGCTTTGCCACCACCTGTCTGTACGCCGCGGCGATCGAGGCCGATCACGACCTCACCCAGCGCGAAGCCGCCGACGTCGCGGGTGTCACTCCCGTTACGCTTCGGACGGCGTACTACGACCTGATCGAGGAGTGA
PROTEIN sequence
Length: 290
VMSQVQSKAACPECSGRLEAGEETFCSDCGLVVAEDYLDRGPEWRSFSDDSENRERTGAPLTRARHDRGLSTEIGRSRDLSSKKRRRLARMRRQHNRARISSKADRNRVYAFTEIRRLVSSLGLPQSIRDQACVLFESAQSADLLRGRSLEGFAAASVYAVCRTAAVSRTVGEIADVARASEAELKAAYDALNRELGLPTGPIDPAEYIGRFASQLDVPKAVEARAREFVTEGRERGLINGRNPSGFATTCLYAAAIEADHDLTQREAADVAGVTPVTLRTAYYDLIEE*