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qh_10_scaffold_7737_4

Organism: QH_10_Halobacteria_71_24

partial RP 23 / 55 MC: 3 BSCG 21 / 51 MC: 1 ASCG 21 / 38 MC: 1
Location: 4128..5240

Top 3 Functional Annotations

Value Algorithm Source
NMD3 family protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5H4_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 360.0
  • Bit_score: 401
  • Evalue 1.20e-108
NMD3 family protein {ECO:0000313|EMBL:EMA40653.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.; similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 360.0
  • Bit_score: 401
  • Evalue 1.70e-108
nmd protein affecting ribosome stability and mRNA decay similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 365.0
  • Bit_score: 379
  • Evalue 8.10e-103

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Taxonomy

Halococcus hamelinensis → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1113
ATGAGCGGCCGAGAGCACGCGGCGCCGTGTCCGCGCTGTGGGGCGCCGGTCGAGCCAGGGGCGCGCGACCCGACCGGCGACGGGGCCGAACTCTGTGCGGACTGCTACTTCGAGCGGCTCGAACTCGTCGACGTCCCCGACCGCGTCGAACTCGTCGTCTGTCCCACCTGCGGCGCCGTCGAGCAGGGCCGTCGCTGGGTGGACGTCGGCGCCGACGACCGCGTCGACGTGGCCGTCGACGCCGTCGCCGACCGCCTGGAGGTCCACGTCGACGCCGACGAGGTGCAGTGGGAGGTCCGCCCCGAACGGGTCGCCGAGACGGAGGTCGTCGTCCACGCCCGGTTCACGGCGCTCGTCCGCGGCCGTCGCGTCACGGTCGACCACGCGATCCCCGTCTCGATCGGCCACGAGACCTGCGAGCGCTGTGGCCGGGTGGCGGGCGACTACCACGAGGCGGTCGTCCAGGTGCGCGCGGCCGGTCGCACGCCGGCCCCGGACGAGCGCCGGGGTGCCCGCGAGGCCGTCGACGCCTACCTCGACGAGCGCGAGGAAGCGGGCGACCGCAACGCCTTCGTCTCCTCGCTCAGCGAGGACGACGACGGTCTCGACGTGCGCGTCTCCACCGCCCAGATCGGTCGCGGCGTCGCCGACCGGATCGTCGCCCGCTTCGGCGGCGCCGTCGACGAGTCCCGCCGCCTGGTCACGGAAGACGGCGACGGCGAGCGGCTCTACCGGATGACCTACCGCGTCCGCCTCCCACAGTTCCGTCCCGGCGACGTGGTCGACGTCGACGACGGCGACGGCCCCGTGCTCGTCCGCAGCGTCCGGGACGGTCTCTCGGGCGTGCGCCTGGAGTCCGGCGAGCCGTTCCGCGCACCCGACGTCGGCGACCGCGAGGCGACGCTCCGAAAGCTCGGCAGCGTCGCCGAGGCCGCCGAAACCGCCCTCGTCAGCGTCGAGGACGAACACGCGGTGCAGGTGCTCGACCCCGAGAGCTACGAGCCGGTGACGATCGCCCGCCCCTCGTTTCTGGACCCCGAGACCGACACCGTCCACGCCGTCAGCACGACCGCCGGCACACACCTCGTGCCGGAGGACGCCGTCGACGGCTGA
PROTEIN sequence
Length: 371
MSGREHAAPCPRCGAPVEPGARDPTGDGAELCADCYFERLELVDVPDRVELVVCPTCGAVEQGRRWVDVGADDRVDVAVDAVADRLEVHVDADEVQWEVRPERVAETEVVVHARFTALVRGRRVTVDHAIPVSIGHETCERCGRVAGDYHEAVVQVRAAGRTPAPDERRGAREAVDAYLDEREEAGDRNAFVSSLSEDDDGLDVRVSTAQIGRGVADRIVARFGGAVDESRRLVTEDGDGERLYRMTYRVRLPQFRPGDVVDVDDGDGPVLVRSVRDGLSGVRLESGEPFRAPDVGDREATLRKLGSVAEAAETALVSVEDEHAVQVLDPESYEPVTIARPSFLDPETDTVHAVSTTAGTHLVPEDAVDG*