ggKbase home page

qh_10_scaffold_27657_1

Organism: QH_10_Parcubacteria_47_8

partial RP 10 / 55 MC: 1 BSCG 11 / 51 MC: 2 ASCG 2 / 38 MC: 1
Location: comp(1..420)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein; K02653 type IV pilus assembly protein PilC Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 140.0
  • Bit_score: 152
  • Evalue 5.10e-34
Type II secretion system F domain; K02653 type IV pilus assembly protein PilC id=5803078 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 140.0
  • Bit_score: 136
  • Evalue 2.70e-29
type II secretion system F domain protein similarity KEGG
DB: KEGG
  • Identity: 31.4
  • Coverage: 137.0
  • Bit_score: 90
  • Evalue 3.70e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF_OD1_10_39_16 → RIF-OD1-1 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGCGTTTTGTCTTTAAAGCAGTAAACAGCGAAGGCGAGCAAAAAAGCGGCACGATAGAGGCGTTCAACGAGGACGCGGCAATTAGCACGCTACAGCGTCGTGATCTCACGATTTTAAATATCGAAAAAGAAGAGGATGCGGTGCCGATCTGGGAGCGGCGCATAGAGTTTTTTGAAAGCGTTTCCAATCGCGAAGTTGTTATACTGTCTCGTCAGATTGCGACATTATTCCAAGCTGATGTTTCTGCGCTTGAGGTGTTTCGCTTACTCTCTAACGCAACCGATAACCCCAAGCTTCGGGATGCTTTGCAGGGCATTGTCTCAGACCTGAAAGGGGGGAGCAATATTTCTGATGCCATGGCCAAGCATGATGATGTTTTCTCCGAGTTTTACGTTAACATGGTTAAATCCGGAGAAGAG
PROTEIN sequence
Length: 140
MRFVFKAVNSEGEQKSGTIEAFNEDAAISTLQRRDLTILNIEKEEDAVPIWERRIEFFESVSNREVVILSRQIATLFQADVSALEVFRLLSNATDNPKLRDALQGIVSDLKGGSNISDAMAKHDDVFSEFYVNMVKSGEE